Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0137 ATGGCTAGGCGTCATGGATGGGAGCTCCCCTTTCACACTTTTCAGATTCGTTCTAACAATGGGATTCAATATTCCTTCATTGACTTGAACTTAAATGTTGAACTGCAGGCTCTCTCCGTGTTCTTTCTTTATGTTCGATGCACTGCCATTGATCCTGCTGATAAGGGAGTCATGGTTGATTGTGACAAGACATCAAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCCAGCAAGATGGGACTAAAGGGTGATGGAATGTCTGATCGGCACAATTCAAATTGGTGCTCTAAAGTTGGATGTTTCTTCTGTGGTTTCCTTGTTAGAGAAGATTGCTGTAGTAATGAAGAAATTAGTCTACAGCAACAGTCTGGGGAAGAGGAGGCTTTGTTCTGCACTTTGTGCAATGCTGAGGTGCAGAAGTTTAGTAAGCATTGTCGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGTCGGTGGTTGAACAATTGTGTTGGAAAGAAGAATTACATCACGTTTGTGTGTCTTATGGCAGTGAGCCTAGTTTGGCTTATAGTTGAATGTGGAGTTGGGATTGCAGTACTTGTCAGATGTTTCGTTGATAAGAAAGGTACAGAGAATCAGATAGCTGAAAAACTTGGAGCTGGTTTCTCTCGAGTCCCATTTGCTATTATTGTGGCCATATGCACAGCAGTTTCATTCCTTGCAACTGTACCTTTGGGAGAATTATTCTTTTTCCATATGATCCTGATACGAAAGGGTATCACAACTTACGAGTATGTTGTTGCCATGAGAACTCTAAGTGAACCACCTGGGCCTTCAGTTGATGGGGGTGAACAGCAGAGTCTACCATCGTCTCCTACTAGTTCAGCTGTCACTGCAATGAGTGGAAGAAGCTCCGTTGGAATGAGTATACAGTACAAAGGTGCCTGGTGTACACCGCCAAGGATCTTTATGGACCACCCGGATGAAATTATACCACATTTGGAGCCGGGACGCCTACCATCCACTGTTGATCCAGATGCCGTACAACCACCTGACAAAGGGAGAAAAATGAACCAGCGCCCTGTGCGTATAAGTGCATGGAAACTTGCAAAATTGGATTCTAATGAGGCAACTAAGGCAGCTGCTAAGGCCAGAGCATCATCGTCTGTGCTTCGTCCAATTAGTTCTCGACCTCATGCGTATGATGTTGATCATGTATCCAGTAGCAATGTGAGTGGAAGAAGCAGCCCAATCAGCAATCAAGGATTTCATATAAAAAATGATACAGTGGGGACATCAAGGTTATCTCCTTCCAAGAGCTCGTACCCTCCTAGTCAAGCAAGCAAGGATGACATAGATGCATCATGCCAACACAGTATGAGTAACTTTAGCAGTCCACGAGTCTCCAACCTTACTCCTTCACCAATGCAGAGGCCAGGTTTGAACAGAGACCATTTCAACCCCATGTATCAACAACCATCGGGAAACCAGTCTCCTTCGTCAGCTAAAGGAAGTGAAGGGAACATAAATCCAGTTCACGACAATGTGCCACGTGTACCAATGAGAAGCAACACCTTAGCTGTTTCAGATAATAGAAGATCGTCAGTGTTTTGGGATCAAGCAGCTGGACGCTTTGTCTCGTCCTCATCAAGAGGTCCCGGAACAGAATTATTGTACACGGGCCGTTCTATATTTTTTGGCAGCCCCGTTGTGAATGAACAGCCAAGTACAGGAACAAGAAGTAGCAGTTCAGTAGTAGCTGGTATTCCGGATAGAGATTCTTCTACATTAAGGGATTTTCAGCAAGGTAGATCACATAGGGGTGGCCAGCTTCCTGTGTTTGTTCCTGGTTGTGGTTATGCCCAGCAAAACAAGTTTCCTTAG 1878 0.443 MARRHGWELPFHTFQIRSNNGIQYSFIDLNLNVELQALSVFFLYVRCTAIDPADKGVMVDCDKTSKNRSKLDEELAEPSKMGLKGDGMSDRHNSNWCSKVGCFFCGFLVREDCCSNEEISLQQQSGEEEALFCTLCNAEVQKFSKHCRSCDKCVDGFDHHCRWLNNCVGKKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDKKGTENQIAEKLGAGFSRVPFAIIVAICTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQQSLPSSPTSSAVTAMSGRSSVGMSIQYKGAWCTPPRIFMDHPDEIIPHLEPGRLPSTVDPDAVQPPDKGRKMNQRPVRISAWKLAKLDSNEATKAAAKARASSSVLRPISSRPHAYDVDHVSSSNVSGRSSPISNQGFHIKNDTVGTSRLSPSKSSYPPSQASKDDIDASCQHSMSNFSSPRVSNLTPSPMQRPGLNRDHFNPMYQQPSGNQSPSSAKGSEGNINPVHDNVPRVPMRSNTLAVSDNRRSSVFWDQAAGRFVSSSSRGPGTELLYTGRSIFFGSPVVNEQPSTGTRSSSSVVAGIPDRDSSTLRDFQQGRSHRGGQLPVFVPGCGYAQQNKFP* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0137 625 MobiDBLite consensus disorder prediction 332 357 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 281 298 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 571 609 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 400 475 - -
Gso4g0137 625 ProSiteProfiles DHHC domain profile. 131 181 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 571 588 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 274 298 - -
Gso4g0137 625 MobiDBLite consensus disorder prediction 398 517 - -
Gso4g0137 625 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 35 470 - -
Gso4g0137 625 PANTHER PROTEIN S-ACYLTRANSFERASE 21 35 470 - -
Gso4g0137 625 Pfam DHHC palmitoyltransferase 128 265 IPR001594 GO:0016409
Gso4g0137 625 MobiDBLite consensus disorder prediction 485 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0137 Gso-Chr4 1187702 1194009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0137 132 262 Lipid Metabolism Gene Families AT4G22750 28.244 1.71e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0137 K20027 - gmx:100798857 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0137 4 1187702 1194009 Gso4g0137 4 1187702 1194009 ECH
Gso4g0137 4 1187702 1194009 Gso6g0125 6 1169404 1175540 GST