Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0123 ATGAGCTTCATTCTGTTTCCGATTCTCTTTGCATTTACCTTTCTGTCCTCGCCCGTTCTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGCATTGATCTGACTTCACAGATTGTGCGCATCACTACTTCACTAAAGGTGCAGAATACGGGATCTGATGTTGTGTCTGAGATTTTGCTGTCCTTTCCTGAGAACCAGGCAAGTAACTTGGCATACTTGAAGGCAACACTTGGTGATGGGAAGGGAAAATCAAAACCATCTTCTGGTGTTGGTTTACCTGTCCAAGTTGTCCGGCCTAAAGATGTGCCACCTTCCTTGACAATTTATTCCGTGTCTTTACCTAAGGGGCTTGGGAAGGGAGATAGTCTGACGTTGGATGTCTTGGCTGTTTTTACCCACTCATTGCAACCATTTCCAGAGAAAATCAACCAGGCTGACATCCAGCTTCTACTGTTTCAAGAAAGTGCACACTATCTCTCCCCATATGCAGTCAAGGTCCAATCACTCACTGTTAAATTGCCTGATGCAAGGATAGAGTCCTATACAAAACTAGAAAATGCAAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAAAATCTTCCTCCATTTTCATACCTGCCAATAGTTATTCACTTTGAGAATAACCAACCCTTTGCTGTTGCTAAAGAGTTGGTTCAAGAGATCGAAATTTCCCATTGGGGCAATGTACAGATCACAGAGCATTACGATATTATCCATGCTGGTTCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCCATTTTTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTACCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACCATTGGATATGGCTTGCCACTTGGGGACTTCTTATTTGGATCGGATGGAAAGCGCTTCCTTAACATCTCTTTTGGTGCCCCTATTAATGAGTTGGTCATTGACACACTATTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATATTTCAGTGTCTGTTCCATTTCCTGTGAAACAATCGGAGGAGACAAAGCTTTCCCACTTGGATATTGTTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAATGTTGTTCCTGAGCATAATGAGCATTTTCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGCTTTTTCTTTCTGTTTCTTGCTTGCATTGTCTACACGCATGCAGATATATCAATCTCCAAATCTTCTGCATCTTATTTGGCAAAGCTCCAGTTGGACGAGGTGCAAGCAACTATTCAGCAGGTCCATGGTATCATTAGCCGTTGCTTAACCGCACATGACAAGCTAGAAATGTCATTACACGATCTTTCAAGGACAGGAGACATTCAAGCCTGTAAAGCAACTCGAAAATCAGTCGATAGCTTACTGAAAGAGCTCTCTAAAGAGTTGAAGCAACCATTGGCAATTTTGCAATCTTCTCCGCAAGCTGCTCAAATATTACCGAAGGTGGAGGAACTTGTTACCAAGGAGAGAGAGTTGCAGGATAAACTTCTAGTAAAACACTCTACAGTTGTAGACGGCTATGAGAAGAAGTCAGCAGGAAGGGAAATTGAGAATCGGATTGCTTCACAACAGCTGAAAATTACTGCTTTGAGACGGGAGATTGATGATCTTATGGACTTGATTGATGAGATATGA 1842 0.4267 MSFILFPILFAFTFLSSPVLSASDLILAKVDRRIDLTSQIVRITTSLKVQNTGSDVVSEILLSFPENQASNLAYLKATLGDGKGKSKPSSGVGLPVQVVRPKDVPPSLTIYSVSLPKGLGKGDSLTLDVLAVFTHSLQPFPEKINQADIQLLLFQESAHYLSPYAVKVQSLTVKLPDARIESYTKLENAKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVQEIEISHWGNVQITEHYDIIHAGSQSKGEFSRLDYQTRPFLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKTAFTIGYGLPLGDFLFGSDGKRFLNISFGAPINELVIDTLFVKVVLPEGSKDISVSVPFPVKQSEETKLSHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFFFLFLACIVYTHADISISKSSASYLAKLQLDEVQATIQQVHGIISRCLTAHDKLEMSLHDLSRTGDIQACKATRKSVDSLLKELSKELKQPLAILQSSPQAAQILPKVEELVTKERELQDKLLVKHSTVVDGYEKKSAGREIENRIASQQLKITALRREIDDLMDLIDEI* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0123 613 Coils Coil 582 613 - -
Gso6g0123 613 Pfam Ribophorin I 28 453 IPR007676 GO:0006486|GO:0016021
Gso6g0123 613 PANTHER RIBOPHORIN I 5 591 IPR007676 GO:0006486|GO:0016021
Gso6g0123 613 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 5 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0123 Gso-Chr6 1157119 1161577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0123 23 551 Miscellaneous Gene Families AT1G76400 68.809 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0123 K12666 - gmx:100817203 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0134 4 1173048 1177647 Gso6g0123 6 1157119 1161577 GST