Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0134 ATGAAAAGAGGCATCATGAGTTCGAATCTGTTTCTGTTTCCAATTCTCTTTTCATTTGCCTTTCTGTCCTCGCCCGTCCTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGCATTGATCTGACTTCACAGATTGTGCGCATCACTACTTCACTAAAGGTACAGAATACGGGATCTGATGTTGTATCTGAGATTTTGCTGTCCTTTCCTGAGAACCAGACAAGTAACTTGGCATACTTGAAGGCAGCACTTGGTGAAGGGAAGGGAAAAGCAAAACCATCTTCTGGTGTTGGTTTACCCGTCGAAGTTGTCCACCTGAAAGATGTGCCGCCTGCCTTGACAATTTATTCCGTATCTTTACCTAAGGGGCTTGGGAAGGGAGATATTCTGACGCTGGATGTCTTGGCTGTTTTTACCCACTCATTGCAACCATTTCCAGAGAAAATCAACCAGGCTGACATCCAGCTTCTACTATTTCAAGAAAGTGCACGCTATCTCTCCCCATATGCAGTCAAGGTCCAATCACTCACTGTTAAATTGCCTGATGCAAGAATAGAGTCCTATACAAAACTAGGAAATGCAAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAGAATCTTCCTCCATTTTCATACTTGCCAATAGTTGTTCACTTTGAGAATAACCAACCCTTCGCTGTTGCTAAAGAGTTGGTGCGAGAGATCGAAATTTCCCATTGGGGCAATATACAGATCACAGAGCATTACAGTATTATCCATGCTGGTGCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCAATTTTTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTACCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACCATTGGATATGGCTTGCCACTTCGAGACTTCTTATTTGGATCGGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTGCCCCTATTAGTGAGTTGGTCATTGACACACTCTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATATTTCAGTATCTGTTCCATTTCCTGTGAAACAATCGCAGGAGACAAAGCTTTCCCACTTGGATATTGTTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAATGTTGTACCTGAGCATAATGAGCATTTTCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGCTTTTTATTTCTGTTTGTTGCGTGCATTGTCTACACGCATGCAGATATATCAATCTCCAAATCTTCTGCATCTTATTTGGCAAAGCTCCAGTGGGACGAGGTGCAAGCAACTATTCAGCAGGTCCATGGTATCATTGGCCGCTGCTTAACTGCACATGACAAGCTAGAAGCGTCATTACACGATCTTTCCAGGACAGGAGACACTCAAGCCTGTAAAGCAACTCGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCTCTAAAGAGTTGAAGCAACCATTGGCAATTTTGCAATCTTCTCCGCAAGCTGCTCAAATATTACCCAAGGTGGAGGAACTTGTTACTAAGGAGAGAGAGTTGCAGGATAAACTTCTAGTAAAACACTCTACAATTGTAGACGCCTATGAGAAGAAAGCAGGAAGGGAAATTGAGAATCGGATTGCTTCACAACAGCAGAAAATTACTGCTTTGAGACGGGAGATTGATGATCTTATGGACTTGATTGATGAGATATGA 1860 0.429 MKRGIMSSNLFLFPILFSFAFLSSPVLSASDLILAKVDRRIDLTSQIVRITTSLKVQNTGSDVVSEILLSFPENQTSNLAYLKAALGEGKGKAKPSSGVGLPVEVVHLKDVPPALTIYSVSLPKGLGKGDILTLDVLAVFTHSLQPFPEKINQADIQLLLFQESARYLSPYAVKVQSLTVKLPDARIESYTKLGNAKLQGSELKYGPYENLPPFSYLPIVVHFENNQPFAVAKELVREIEISHWGNIQITEHYSIIHAGAQSKGEFSRLDYQTRQFLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKTAFTIGYGLPLRDFLFGSDGKRFLNISFGAPISELVIDTLFVKVVLPEGSKDISVSVPFPVKQSQETKLSHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFLFLFVACIVYTHADISISKSSASYLAKLQWDEVQATIQQVHGIIGRCLTAHDKLEASLHDLSRTGDTQACKATRKSVDSSLKELSKELKQPLAILQSSPQAAQILPKVEELVTKERELQDKLLVKHSTIVDAYEKKAGREIENRIASQQQKITALRREIDDLMDLIDEI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0134 619 Coils Coil 588 619 - -
Gso4g0134 619 PANTHER RIBOPHORIN I 12 597 IPR007676 GO:0006486|GO:0016021
Gso4g0134 619 Pfam Ribophorin I 35 460 IPR007676 GO:0006486|GO:0016021
Gso4g0134 619 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 12 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0134 Gso-Chr4 1173048 1177647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0134 30 558 Miscellaneous Gene Families AT1G76400 68.809 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0134 K12666 - gmx:100796192 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0134 4 1173048 1177647 Gso4g0134 4 1173048 1177647 ECH
Gso4g0134 4 1173048 1177647 Gso6g0123 6 1157119 1161577 GST