Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0114 ATGGCGTTCATTTGGCGGTTCTGTGGTGTGTCTCTATGCAACTTCACAGCCTCTAATGCCCAGAAAGGTCCTTCTCCTTCTCTGCCCATAACCTTGGACTTGGAGCATCATATAACAACACCATCTTTACTTTCTTCCATCGAAGAAGAAGAAGGACGCGCGGTTAATAGGAGACAACTTATTCTTCACACGCCAGTAGCAGCAGCAGCTGCATTTGCAGTCCCAAATGCATTGGCACTCAATGATGTGTCTGAGGATGTTCGTGTCTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCGAAGAGTGGCAAGTGGGAACAGGAGACGGAGAATCTAGTGGGTTTAAATCCATAACTGCTTTCTACCCAACACAGGCATCCAATTCCAATGTGAGCGTTGTGATCACAGGGCTGGGACCGGATTTCACCAGGATGGAATCCTTTGGCAAAGTTGACGAGTTTGCTCAGACTCTAGTTAGTGGGCTTGACAGAAGCTGGCGAAAACCCCCGGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTAATGGGATTTATTACATCGAGTATTTGCTGCAAAATCCTGGTGAGAGTCGCAGGTATTTGTATTCAGCTATTGGGATGGCATCAAATGGTTGGTATAACAGACTGTATACCGTGACAGGACAGTATGTGGAAGAGGACACAGACAAGTATGCTTCAAAAGTTCAGAAGGTAGTTGCATCATTTAGGTTCATATGA 747 0.4538 MAFIWRFCGVSLCNFTASNAQKGPSPSLPITLDLEHHITTPSLLSSIEEEEGRAVNRRQLILHTPVAAAAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPEEWQVGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTDKYASKVQKVVASFRFI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0114 248 PANTHER - 41 248 - -
Gso6g0114 248 Pfam PsbP 86 247 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso6g0114 248 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 41 248 - -
Gso6g0114 248 SUPERFAMILY Mog1p/PsbP-like 88 247 IPR016123 -
Gso6g0114 248 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 79 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0114 Gso-Chr6 1102490 1104787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0114 - - gmx:100805637 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0127 4 1119218 1121603 Gso6g0114 6 1102490 1104787 GST