Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0127 ATGGCGTCCATTTCGCGGTTCTGTTGTGTGCATATGCGAGCGTCTCTATGCAACTTCACAGCCCAGAAAGGTCCATCACCTCCCACAACCTTGGACTTGGAGCATCATAAAACAACACCATGTTTGCTTTCTTCCATCGAAGAAGGACGTGCGGTTAATAGGAGACAACTTATTCTTCACACGCCAGTAGCAGTAGCTGCATTTGCAGTCCCAAATGCATTGGCACTCAATGATGTGTCTGAGGATGTTCGTGTCTACACTGACGATGAGAACAAGTTCAAGATTGAGATTCCCCAAGAGTGGCAAGTGGGAACAGGAGACGGAGAATCTAGTGGGTTTAAATCCATAACTGCTTTCTACCCAACAGTGGCATCCAATTCCAATGTGAGCGTTGTGATCACAGGGCTGGGACCGGATTTCACTAGGATGGAATCCTTTGGCAAAGTTGACGAGTTTGCCCAGACTCTAGTTAGTGGGCTTGACAGAAGCTGGCGAAAACCCCCGGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTGATGGGATTTATTACATCGAGTATTCGCTGCAAAATCCCGGTGAGAGTCGCAGGTATTTATATTCAGCTATCGGGATGGCATCAAATGGTTGGTATAACAGACTGTATACGGTGACAGGACAGTATGTGGAAGAGGAAACAGACAAGTATGCTTCAAAAGTTCAGAAGGTAGTTGCATCATTTAGGTTCATATGA 735 0.4585 MASISRFCCVHMRASLCNFTAQKGPSPPTTLDLEHHKTTPCLLSSIEEGRAVNRRQLILHTPVAVAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESSGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASKVQKVVASFRFI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0127 244 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 75 243 - -
Gso4g0127 244 PANTHER - 32 244 - -
Gso4g0127 244 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 32 244 - -
Gso4g0127 244 SUPERFAMILY Mog1p/PsbP-like 84 243 IPR016123 -
Gso4g0127 244 Pfam PsbP 82 243 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0127 Gso-Chr4 1119218 1121603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0127 - - gmx:100785276 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0127 4 1119218 1121603 Gso4g0127 4 1119218 1121603 ECH
Gso4g0127 4 1119218 1121603 Gso6g0114 6 1102490 1104787 GST