Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0108 ATGGAAGCGTTGATCGAGTTATGCGACCTCATTGCGCAGAATCCCTCGCAATTCTCCGATAAGCTCTCGTGGATATGCGACAAATGCCCTCTGCCGGAGTACCTCTCGGCGGGCTCTCCTAGGGTTTCGCGCTCTCAGCTCAATGCCGTCCTCGCCGTCTCGCGCTTCCTCTCCAACTGCCCCGATTCCGCCGATCTGCGCCCAAAGTCCGTCGTCCTCGAGTTCCTCCGCTCCGTTCCCCATTCCTTCACTCAATCCTTCTGGCCCCACCCTTTCAGCCTCGATTCCGTCGCCTCTTTCTTCCTCGATTTCACCGGCTACGTCTCCAAGGCCGCGCAATCCTCGCCGGATTTCGCCGAGGAGCTCGCCGCCTTCTCCGGCGAGGTAGTGATTTCCGCGATCCGCGAACAGCGCTCCAGCATTGCTAGGGCTTTCTTGGCCGCTCTCTCGCAGAACTTTCTTCCAATTTCGTCCTCCGATGCCAACAGATTGGTGACTTGTTTAATCGATCAATTCGCTGCGCCTACGGTGGGGCCTGTTCCAGGCACGCCGAGGGAACAACTCGCTGCGGAAAATTCCTCGGCTCAGAGCTCGCCCATCAGTGTGAACCATCAATCCCTGACCAATTACAATGACAGTCCCGGGAATGAGAATGTTTCGGGTTCCTCGAGCAGTGTGGCTTCTAAGGCCGCGGATGATGCCAGCACCGCCTCGTCGAGAGGGATGGTGAATGGGGGAAACCATGTCTGGAGGACCAGTGCTGATCAATTGGCACAGAATTTGGGTTTAAATGATGGTGGTCTTGGCGTGGTCTCGTCTGGCCATCATCTTGTTTTGTTTGAGGAAGAGTCCGTGGAGTTCTTGGAGAGGCAGGAAATAGCTTTTAAGTTGATTGCTCACGTGTTGGAGAAGGTCCACGTTGAACCTGTGCTTTTGGAGCAGGTTAGGTTAATTGGGAAGAAACAGATACAGTCCATGTCTGTGTTTCTGAAGATAAGGAAGAGGGATTGGCATGAGCAGGGGTCTCTTTTAAAAGCTAGGATTAATACCAAACTGTCAGTGTATAAAGCAGCGGTGAACCTGAAAATCAAGAGCCTCTCAGCACTGGATTCTGATTCGAGGTCTGTTAAGAGGTTGGTTTATGAGGCAGTTGCGATACTGATAGATGCTGCTGAGGCATGCTTACTCTCTGGATGGCGTAAGTTGAGATCGTGTGAAGAGCTCTTCAGTTCATTGCTTCTTGGGGTAGCACATATTGCTATTGCCCGAGGAGGACAGCCGCTGCGTATTTTGCTCATTCGCCTAAAGCCAATTGTTCTCAACGTTTGTGCTCAGCCTGATACATGGAGTAACACCCATGGGGGCATGTTTGAGAGTGTCATGAAGGCCAGCTGTCAGATAATTGAATCCTGCTGGAATAAGGAGCGAGCCCCTGTTGACACATACATAATGGGATTAGCTACAAGCATACGTGAACGAAATGATTATGAAGAACAGGACAACCAAGAGAAGCCTGAAGTTCCTTTTGTACAGCTTAATGTTATACGCCTGTTTGCTGAGCTGAGCGCTGCAGTCAACAAGTCTGAGCTGGTAGACGTGTTATTACCTCTTTTTATTGAAAGCCTAGAAGAGGGTGATGCTTCAACTCCTAGTTTGTTGAGACTCCGACTTCTTGACGCTGTGTCTCGAATGGCCAGTTTAGGTTTTGAGAAATCTTACCGTGAAACAGTGGTTTTGATGACTAGAAGTTACTTGAACAAACTTTCCAGTGTAGGATCAGCTGAAAGCAAAACAGAGGCAACTGAAGCCACAACTGAGCGAGTTGAAACTCTACCTGCAGGATTTCTTGTTATTGCTAGTGGTCTTACTAGTGATAGATTGCGTTCAGATTTTCGTCATCGACTGCTCTCCCTATGCTCAGATGTTGGTTTAGCTGCTGAGGCTAAAAGTGGAAGGAGTGGAGCAGATTTCCTGGGTCCTCTGCTCCCGGCAGTTGCTGCAATTTGTTCCGATTTTGATCCTACTTTAAATGTGGAGCCATCACTTTTAAAACTATTTCGCAACCTATGGTTCTATGTTGCTCTTTTTGGCCTAGCGCCACCGATACAGAAGACTCCAGTAAATACAAAGTCAGTTTCCAGTACACTGAACAGTGTGGGAAGCATGGGTGCAATTTCCCTCCAAGCTGTAAATGGACCATATATGTGGAATGTGGAGTGGTCTTCTGCTATTCAAAGAATTTCTCAGGGGACTCCTCCACTAGTTGTTAGCTCAGTGAAATGGCTCGAGGATGAGTTAGAACTAAATGCTTTGCACAACCCAGGCAGTCGTCAAGGCAGTGGCAATGAGAAAGCTGCACTTGCACAAAGGGCTGCTCTTTCTGCAGCTTTAGGAGGGAGAGTTGATGTCACAGCAATGACCACAATCTCAGGAGTGAAGGCTACTTATCTTCTTGCTGTAGCTTTTCTTGAGATCATCCGCTTCAGCAGCAATGGTGGAATCCTAACTGGTGGCACCACTATGGATGCTGCAAGAAGTGCCTTTACTTGTGTCTTTGAATATCTCAAGACTCCAAATTTAATGCCAGCTGTCTTTCAGTGTTTAACAGCAATTGTCCACAGGGCTTTTGAAACAGCTCTGTCATGGCTGGAAGATCGAGTTTCTGAAATAGGCCATGAAGCTGAGACCCGAGATTCAATACTTACAATGCATACCTGTTTTCTAATAAAAAGTCTGTCCCAGAGGGAGGATCATATACGAGATATTGCAGAGAACTTGTTGAATCAACTCAGAGATAAGTTTCCACAGGTAAATTTTCAACAGTATGTTATAAATATGCTTACATGTATATGTAATTACTTGCCTAATGTGTCTCTGCCTTTTTTTTTGACATCTGCAATATATTTAAGATTAATGGTATCTTTGCAGGTTTTATGGGATTCTTCCTGCATAGATTCTTTGCTATTTTCATTTAATGGCGACTCTTCTACTGCGGTCATCAATGATCCTGCTTGGACAGCAACAGTCCGTACCTTGTATCAGAGAATTGTTCGAGAATGGATAATTAAATCAGTTTCAAGTGCTCCGTGCACTAGCCAGGGCCTTCTTCAGGATAAACTTTGTAAAGCGAATACTTGGCAAAGAGCACAGCCCACAATTGATGTTGTTTTACTTTTATCTGAGATAAGAATTGGCACTGGAAAAAATGACAACTGGCCAATACAAACAGCAAACGTTCCTGCAGTCATGGCTGCAGCAGCTGCAGCTTCAGGAGCAAACTTAAAAGCATCAGAGTCTTTTAATTTAGATGTTATCAGTTCTGGTAAGTGTAACCAAGCTGCAGCGACAGTTAAGTGCAACCATGCTGGAGAAATTGCTGGAATGAGAAGGTTGTATAACAGCATTGGTGGATTTCAGTCCAGTACGGCACCTCCTGGTCTTGGACTTGGAGCTGGGCTTCAAAGAATTATATCTGGAGCTTTTCCTCAGCAGCCACAAGCTGAGGATGACTCGTTCAATGGAATGTTGCTTAATAAGTTTGTGCGTTTACTTCAACAGTTTGTCAACATAGCAGAGAAAGGTGGGGAAGTGGTCAGGTCTGAATTTCGTGATACTTGCTCTCAGGCCACTGTGCTGCTTTTGTCACATTTGAGTTCTGGATCCAAATCGAACGTGGAGGGCTTCTCACAACTTCTCCGTCTTCTTTGTTGGTGTCCTGCTTACATTTCCACTCATGATGCAATGGAAACTGGTGTTTTCATATGGACATGGTTGGTTTCTGCTGCACCTGAACTTGGAGCTCTTGTCCTTGCTGAGCTTGTCGATGCATGGTTATGGACAATTGATACCAAGCGGGGTCTTTTTGCATCTGAAGCAAGGTATTCTGGACCTGCTGCAAAACTCAGGCCTCACCTGTCCCCTGGGGAGCCTGAATTGCAGCCCGAGATTGATCCTGTGGAGCAGATAATTGCTCATCGACTATGGCTTGGATTTCTCATTGATCGCTTTGAGGCAATTCGACACCAAAGTGTCGAGCAACTCCTGCTTTTTGGTAGGATGTTGCAGGGGACAACAAAGCTTCCTTGGAATTTTTCACACCATCCTGCAGCCAGTGGCACTTTTTTCACTCTTATGCTTCTAGGACTCAAGTACTGCTCTTGCCAGTTTCAGGGCAATCTGCAAAAATTTCAAATGGGGCTTCAGCTGCTGGAAGATCGGATTTATAGGGCATCTTTGGGTTGGTTTGCTTTTGAGCCTGAATGGTATGACACAAACTATACAAACTTTGCTCATTGTGAGGCTCAGTCTGTTTCTCTATTTGTTCAATACCTTTCAAATATGAAAGGAGATACCGTCCAAGTTGGTTCAAAAGGAAATGGACAAGAAAATGGAAACACTTTGGCTGATGCGAGTGACCACTATCATCCTGTTTGGGGTCAAATGGAGAACTATTCTGTAGGAAGAGAAAAACGGAGGCAGCTACTTTTAATGCTATGCCAGCATGAGGCTGATAGGCTTGACGTCTGGGCGCAGCCAACTAACACAAAGGAAAGTAGTTCCCGACCCAAGATTAGTGCAGATAAATGGATAGAATATACCAGGACTGCCTTCTCTGTGGATCCTAGGCTTGCTTTATCCTTGGCCTCAAGGTTCCCAACCAATGCATTTGTAAAAACTGAAGTAACTCAGCTTGTACAGGCAAATATAGTGGATGTTCGCAACATACCAGAAGCATTACCTTACTTTATCACCCCAAAGGCAGTTGATGACAGTTCGGTGCTCTTGCAACAATTGCCTCATTGGGCTCCTTGTTCTATTACACAAGCTTTAGAGTTCCTTTCTCCTGCGTACAAGGGTCATCCACGGGTCATGGCATACGTTCTAAGGGTTCTGGAATCCTATCCTCCTGAACGAGTAACTTTTTTCATGCCACAGCTGGTGCAGTCGTTGCGACATGATGAAGGGAAATTAGTTGAAGGTTATTTGCTTAGAGCTGCTCAAAGAAGTGACATATTTGCCCATATTCTTATCTGGCATTTGCAGGGTGAGACTGTACCCGAGACAGGAAAAGACCCAAACAGTGGGAAGAATAATTCATTTCTAGAACTGCTGCCAGCTGTAAGGCAGCGTATAATTGACGGTTTTAATCCAAAGGCACTTGACATATTTAAAAGAGAGTTTGATTTCTTTGACAAAGTTACATCCATCTCTGGTGTACTATTTCCACTTCCTAAAGAAGAACGCCGAGCCGGTATCCGAAGGGAGTTGGAGAAAATTGAAATGGACGGTGAGGACCTTTATTTACCGACAGCTCCTAACAAGCTTGTTAGGGGTATTCGAGTAGATAGTGGTATTCCCTTACAATCAGCCGCAAAAGTTCCAATCATGATAACTTTTAATGTAATTGATCGAGATGGGGACGAAAATGATGTAAAGCCACAAGCTTGCATTTTCAAGGTTGGAGATGACTGTAGACAAGATGTTCTTGCCCTTCAAGTGATAGCACTACTTAGAGATTTATTTGAAGCCATTGGATTAAATCTTTATCTATTTCCTTATGGTGTACTGCCTACTGGTCCCGAGAGAGGTATAATAGAGGTTGTGCCAAATACGCGCAGTAGAAGTCAGATGGGGGAAACAACTGATGGAGGTTTGTTTGAGATATTTCAGCAAGACTATGGACCTGTTGGGTCTGCCAGTTTTGAGGCTGCACGCCAGAACTTTATCATTAGCAGTGCTGGTTATGCTGTTGCTAGTCTTTTGCTTCAACCAAAGGATAGGCACAATGGGAACCTTCTTTTTGATAATGTTGGGAGGCTTGTTCATATTGACTTCGGTTTCATCCTAGAAACTTCTCCCGGTGGGAATATGCGTTTTGAAAGTGCTCATTTTAAGCTGAGCCATGAGATGACACAATTACTAGATCCATCTGGTGTTATGAAGAGTGATACATGGAATCAATTTTTAAGTTTGTGCGTGAAGGGGTACCTTGCTGCCCGTCGACGAATGGATGGGATCATCACTACTGTGGCATTAATGCTAGACAGCGGGTTACCTTGCTTCAGCAGGGGTGACCCGATTGGCAATCTTCGGAAGAGATTTCATCCGGAGATGAGTGAGCGTGAAGCAGCCAATTTCATGACACATGTTTGTAAAGATGCTTATAATAAGTGGACCACTGCTGGCTATGACTTGATACAGTATCTGCAGCAAGGCATCGAGAAGTAA 6228 0.4549 MEALIELCDLIAQNPSQFSDKLSWICDKCPLPEYLSAGSPRVSRSQLNAVLAVSRFLSNCPDSADLRPKSVVLEFLRSVPHSFTQSFWPHPFSLDSVASFFLDFTGYVSKAAQSSPDFAEELAAFSGEVVISAIREQRSSIARAFLAALSQNFLPISSSDANRLVTCLIDQFAAPTVGPVPGTPREQLAAENSSAQSSPISVNHQSLTNYNDSPGNENVSGSSSSVASKAADDASTASSRGMVNGGNHVWRTSADQLAQNLGLNDGGLGVVSSGHHLVLFEEESVEFLERQEIAFKLIAHVLEKVHVEPVLLEQVRLIGKKQIQSMSVFLKIRKRDWHEQGSLLKARINTKLSVYKAAVNLKIKSLSALDSDSRSVKRLVYEAVAILIDAAEACLLSGWRKLRSCEELFSSLLLGVAHIAIARGGQPLRILLIRLKPIVLNVCAQPDTWSNTHGGMFESVMKASCQIIESCWNKERAPVDTYIMGLATSIRERNDYEEQDNQEKPEVPFVQLNVIRLFAELSAAVNKSELVDVLLPLFIESLEEGDASTPSLLRLRLLDAVSRMASLGFEKSYRETVVLMTRSYLNKLSSVGSAESKTEATEATTERVETLPAGFLVIASGLTSDRLRSDFRHRLLSLCSDVGLAAEAKSGRSGADFLGPLLPAVAAICSDFDPTLNVEPSLLKLFRNLWFYVALFGLAPPIQKTPVNTKSVSSTLNSVGSMGAISLQAVNGPYMWNVEWSSAIQRISQGTPPLVVSSVKWLEDELELNALHNPGSRQGSGNEKAALAQRAALSAALGGRVDVTAMTTISGVKATYLLAVAFLEIIRFSSNGGILTGGTTMDAARSAFTCVFEYLKTPNLMPAVFQCLTAIVHRAFETALSWLEDRVSEIGHEAETRDSILTMHTCFLIKSLSQREDHIRDIAENLLNQLRDKFPQVNFQQYVINMLTCICNYLPNVSLPFFLTSAIYLRLMVSLQVLWDSSCIDSLLFSFNGDSSTAVINDPAWTATVRTLYQRIVREWIIKSVSSAPCTSQGLLQDKLCKANTWQRAQPTIDVVLLLSEIRIGTGKNDNWPIQTANVPAVMAAAAAASGANLKASESFNLDVISSGKCNQAAATVKCNHAGEIAGMRRLYNSIGGFQSSTAPPGLGLGAGLQRIISGAFPQQPQAEDDSFNGMLLNKFVRLLQQFVNIAEKGGEVVRSEFRDTCSQATVLLLSHLSSGSKSNVEGFSQLLRLLCWCPAYISTHDAMETGVFIWTWLVSAAPELGALVLAELVDAWLWTIDTKRGLFASEARYSGPAAKLRPHLSPGEPELQPEIDPVEQIIAHRLWLGFLIDRFEAIRHQSVEQLLLFGRMLQGTTKLPWNFSHHPAASGTFFTLMLLGLKYCSCQFQGNLQKFQMGLQLLEDRIYRASLGWFAFEPEWYDTNYTNFAHCEAQSVSLFVQYLSNMKGDTVQVGSKGNGQENGNTLADASDHYHPVWGQMENYSVGREKRRQLLLMLCQHEADRLDVWAQPTNTKESSSRPKISADKWIEYTRTAFSVDPRLALSLASRFPTNAFVKTEVTQLVQANIVDVRNIPEALPYFITPKAVDDSSVLLQQLPHWAPCSITQALEFLSPAYKGHPRVMAYVLRVLESYPPERVTFFMPQLVQSLRHDEGKLVEGYLLRAAQRSDIFAHILIWHLQGETVPETGKDPNSGKNNSFLELLPAVRQRIIDGFNPKALDIFKREFDFFDKVTSISGVLFPLPKEERRAGIRRELEKIEMDGEDLYLPTAPNKLVRGIRVDSGIPLQSAAKVPIMITFNVIDRDGDENDVKPQACIFKVGDDCRQDVLALQVIALLRDLFEAIGLNLYLFPYGVLPTGPERGIIEVVPNTRSRSQMGETTDGGLFEIFQQDYGPVGSASFEAARQNFIISSAGYAVASLLLQPKDRHNGNLLFDNVGRLVHIDFGFILETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSDTWNQFLSLCVKGYLAARRRMDGIITTVALMLDSGLPCFSRGDPIGNLRKRFHPEMSEREAANFMTHVCKDAYNKWTTAGYDLIQYLQQGIEK* 2076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0108 2075 SMART pi3k_hr2_4 1532 1725 IPR001263 -
Gso6g0108 2075 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 1552 1688 IPR001263 -
Gso6g0108 2075 ProSiteProfiles PIK helical domain profile. 1530 1710 IPR001263 -
Gso6g0108 2075 SUPERFAMILY ARM repeat 458 968 IPR016024 -
Gso6g0108 2075 MobiDBLite consensus disorder prediction 179 246 - -
Gso6g0108 2075 MobiDBLite consensus disorder prediction 187 246 - -
Gso6g0108 2075 Gene3D - 1719 1867 - -
Gso6g0108 2075 PANTHER PHOSPHATIDYLINOSITOL KINASE 1 941 IPR015433 GO:0046854|GO:0048015
Gso6g0108 2075 PANTHER PHOSPHATIDYLINOSITOL KINASE 979 2074 IPR015433 GO:0046854|GO:0048015
Gso6g0108 2075 PANTHER BNAA06G03180D PROTEIN 979 2074 - -
Gso6g0108 2075 PANTHER BNAA06G03180D PROTEIN 1 941 - -
Gso6g0108 2075 CDD PI4Kc_III_alpha 1775 2074 - -
Gso6g0108 2075 Gene3D - 1523 1696 IPR042236 -
Gso6g0108 2075 SUPERFAMILY Protein kinase-like (PK-like) 1719 2068 IPR011009 -
Gso6g0108 2075 Pfam Phosphatidylinositol 3- and 4-kinase 1875 2022 IPR000403 -
Gso6g0108 2075 Pfam Phosphatidylinositol 3- and 4-kinase 1815 1874 IPR000403 -
Gso6g0108 2075 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1818 1832 IPR018936 GO:0016301
Gso6g0108 2075 Gene3D - 1868 2063 IPR036940 GO:0016301
Gso6g0108 2075 Pfam PI4-kinase N-terminal region 295 947 IPR045495 -
Gso6g0108 2075 Pfam PI4-kinase N-terminal region 976 1517 IPR045495 -
Gso6g0108 2075 SMART pi3k_hr1_6 1815 2072 IPR000403 -
Gso6g0108 2075 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1781 2059 IPR000403 -
Gso6g0108 2075 SUPERFAMILY ARM repeat 1522 1684 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0108 Gso-Chr6 1034914 1056512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0108 1 2075 Acyl Lipid Metabolism Gene Families AT1G49340 71.797 0.0 3004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0108 K00888 - gmx:100796422 3877.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0121 4 1051546 1070007 Gso6g0108 6 1034914 1056512 GST