Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0121 ATGGAAGCGTTGATCGAGTTATGCGACCTCATTGCGCAGAATCCGTCGCTATTCTCCGACAAGCTCTCGTGGATATGCGACAAATGCCCCCCGCCGGAGTACCTCTCGGCGGGATCTCCTAGGGTTTCGCGCTCTCAGCTCAATGCCGTCCTCGCCGTCGCGCGCTTCCTCTCCAACTGCCCCGATTCCGCCGATCTGCGCCCAAAGTCCGTCGTCCTCGAGTTCCTCCGCTCCGTTCCCCATTCCTTCACTCAATCCTTCTGGCCCCACCCTTTCAGCCTCGATTCCGTCGCCTCTTTCTTCCTCGATTTCATCGGCTACGTCTCCAAGGCCGCACAATCCTCACCGGATTTCGCCGAGGAGCTCGCCGCCTTCGCCGGCGAAGTAGTGATTTCCGCGATCGGCGAACAGCGCTCTGGCATTGCTAGGGCTTTCTTGGCCGCTCTCTCGCAGAACTTTCTTCCAATTTCGTCCTTCGATGCCAACAGATTGGTGACTTGTTTAATCGATCAATTCGCTGCGCCTACGGTGGGGCCTGTTCCAGGCATGCCGAGGGAACAACTTGCTGCGGAAAATTCCTCGGCTCAGAGCTCGCCCATCAGTGTGAACCACCAATCCCTAACCAATTACAATGACAGTCCCGGGAATGAGAATGCTTCGGGTTCCTCGAGCAGTGTGGCTTCTAAGGCCGCGGATGATGTCAGCACGGCGTCGTCGAGAGGGATGGTGAATGGGGGAAACCATGTTTGGAGGACCGGTGCTGATCAATTGGCGCAGAATTTGGGTTTAAATGATGGTGGTCTTGGCGCGTTCTCGTCTGGCCAACAAGTTGTTTTGTTCGAGGAAGAGTCTGTGGAGTTCTTGGAGAGGCAGGAAATAGCTTTTAAGTTGATTGCTCACGTGTTGGAGAAGGCCCACGTTGAACCTGCGCTTTTGGAGCAGGTTAGGTTAATCGGGAAGAAGCAGATACAGTCCATGTCTGTGTTTCTGAAGATAAGGAAGAGGGATTGGCATGAGCAGGGGTCTCTTTTAAAAGCTAGGATTAATACCAAACTGTCAGTTTATAAAGCAGCGGTGAACCTGAAAATCAAGAGCCTCTCAGCACTGGATTCCGATTCGAGGTCTGTTAAGAGGTTGGTTTATGAGGCAGTTGCGATATTGATAGATGCTGCCGAGGCGTGCTTACTCTCTGGATGGCGTAAGTTGAGATTGTGTGAAGAGCTCTTCAGTTCATTGCTTCTTGGGGTAGCACATATTGCTATTGCCCGAGGAGGACAGCCGCTGCGTATTTTGCTCATTCGCCTAAAGCCAATTGTTCTCAACGTTTGTGCTCAGCCTGATACATGGAGTAATACCCACGGAGGCATGTTTGAGAGTGTCATGAAGGTCAGCTGTCAGATAATTGAATCCTGCTGGAATAAGGAGCGAGCCCCTGTTGACACATACATAATGGGATTAGCCACAAGCATACGTGAACGAAATGATTATGAAGAACAGGACAACCAAGAGAAACCTGCAGTTCCTTTTGTACAGCTTAATGTTATACACCTGTTTGCTGAGCTGAGCGCTGCAGTCAACAAGTCTGAGCTGGTAGACGTGTTATTACCTCTTTTTATTGAAAGCCTAGAAGAGGGTGATGCTTCAACTCCTAGTTTGTTGAGACTCCGACTTCTTGATGCCGTGTCTCGAATGGCCAGTTTAGGTTTTGAGAAATCTTACCGTGAAACAGTGGTTTTGATGACTAGAAGTTACCTGAACAAACTTTCCAGTGTAGGATCAGCTGAAAGCAAAACAGAGGCAACTGAAGCCACAACTGAGCGAGTTGAAACTCTACCTGCAGGATTTCTTCTTATTGCTAGTGGTCTTACTAGTGATAGACTGCGTTCAGATTTTCGTCATCGATTGCTCTCCCTATGCTCAGACGTTGGTTTAGCTGCTGAGGCTAAAAGTGGAAGGAGTGGAGCAGATTTCCTGGGTCCTTTGCTCCCTGCAGTTGCTGCAATTTGTTCCGATTTTGATCCTACTTTAAATGTGGAGCCATCACTTTTAAAACTATTTCGCAACCTATGGTTCTATGTTGCTCTTTTTGGCCTAGCGCCACCGGTACAGAAGACTCCAGTAACTACAAAGTCAGTTTCAAGTACACTGAACAGTGTGGGAAGCATGGGTGCAATTTCCCTTCAAGCTGTAAATGGACCATATATGTGGAATGTGGACTGGTCTTCTGCTGTTCAACGAATTTCTCAGGGGACTCCTCCACTAGTTGTTAGCTCAGTGAAATGGCTCGAGGATGAGTTAGAACTAAATGCTTTGCACAACCCAGGCAGTCGTCAAGGCAGTGGCAATGAAAAGGCTGCACTTGCACAAAGAGCTGCTCTTTCTGCAGCTTTAGGAGGGAGAGTTGATGTCACAGCAATGACCACAATCTCAGGAGTGAAGGCTACTTATCTTCTTGCTGTAGCTTTTCTTGAGATCATCCGCTTCAGCAGCAATGGTGGAATCTTAACTGGTGGCACCACTATGGATGCTGCAAGAAGTGCCTTTACTTGTGTCTTTGAATATCTCAAGACTCCAAATTTAATGCCAGCTGTCTTCCAGTGTTTAGCAGCAATCGTCCACAGGGCTTTTGAAACAGCGGTGTCATGGCTGGAAGATCGAGTTTCTGAAATAGGCCATGAAGCTGAGACCCGAGATTCAATACTTACAATGCATACCTGTTATCTAATAAAAAGTCTGTCCCAGAGGGAGGATCATATACGAGATATTGCAGAGAACTTGTTGACTCAACTCAGAGATAAGTTTCCACAGGTTTTATGGGATTCTCCTTGCATAGACTCTTTGCTATTTTCATTTAATGACGACTCTTCCACTACCATCATCAACGATCCTGCTTGGACAGCAACAGTCCGTACCTTGTATCAGAGAATTGTTCGAGAATGGATAATAAAATCAGTTTCTAGTGCTCCGTGCACTAGCCAGGGCCTTCTTCAGGATAAACTCTGTAAAGCAAATACTTGGCAAAGAGCACAGCCCACAATTGATGTTGTTTTACTTTTATCTGAGATAAGAATTGGCACCGGGAAAAATGACAATTGGCCAATACAAACAGCAAATATTCCTGCAGTCACGGCTGCAGCAGCTGCAGCTTCAGGGGCAAATTTAAAAGCATCAGAGTCTTTTAATTTGGATGTTATTAGTTCTGGTAAGTGTAACCAAGCTGCAGCGACAGTTAAGTGCAACCATGCTGGAGAAATTGCTGGGATGAGAAGGTTGTATAACAGCATTGGTGGATTTCAGTCCAGTACTGCACCTTCTGGTCTTGGACTTGGAGCTGGGCTTCAAAGAATTATATCTGGAGCTTTTCCTCAGCAGCCACAAGCTGAGGATGACTCGTTCAATGGAATGTTGCTTAATAAGTTTGTGCGTTTACTTCAACAGTTTGTCAACATAGCAGAGAAAGGTGGGGAAGTGGTCAGGTCTGAATTTCGTGATACTTGCTCTCAGGCCACTGTGCTGCTTTTATCAAATTTGAGTTCTGGATCCAAATCAAACGTGGAGGGCTTCTCACAACTTCTTCGTCTTCTTTGCTGGTGTCCTGCTTACATTTCCACTCATGATGCAATGGAAACTGGTGTTTTCATATGGACATGGTTGGTTTCTGCTGCACCTGAACTTGGAGCTCTCGTTCTTGCTGAGCTTGTTGATGCATGGTTATGGACAATTGACACCAAGCGGGGTCTTTTTGCATCTGAAGCAAGGTATTCTGGACCTGCTGCAAAACTCAGGCCTCACCTATCCCCTGGGGAGCCTGAATTGCAGCCTGAGACTGATCCCGTGGAGCAGATAATTGCTCATCGACTATGGCTTGGATTTCTAATTGATCGCTTTGAGGCAATTCGACACCAAAGTGTGGAGCAACTTCTGCTTTTTGGTAGGATGTTGCAGGGGACAACAAAGCTTCCCTGGAATTTTTCACACCATCCTGCGGCCAGTGGCACTTTTTTCACTCTTATGCTTCTAGGGCTCAAGTACTGCTCTTGCCAGTTTCAGGGCAATCTGCAAAAATTTCAGATGGGGCTTCAGCTGCTGGAAGATCGGATATATAGGGCATCTTTGGGTTGGTTTTCTTTTGAGCCAGAATGGTATGACACAAACTATACAAACTTTGCTCAGTGTGAGGCTCAATCTGTTTCTCTATTTGTTCAATACCTTACAAATATGAAAGGAGATACTGTCCAAGTTGGTTCAAAAGGAAATGGACAAGAAAATGGGAATCCTTTGGCTGATGTGAGTGATCACCATCATCCTGTTTGGGGTCAAATGGGGAACTATGCTGCAGGAAGAGAAAAACGGAGGCAGCTACTTTTAATGCTTTGCCAGCATGAGGCTGATAGGCTTGATGTCTGGGCACAGCCGACTAACACAAAGGAAAGTAGTTCCCGACCCAAGATTAGTGCAGATAAATGGATAGAATATACTAGGACTGCCTTCTCTGTGGATCCTAGGCTTGCTTTATCCTTGGCCTCAAGGTTCCCGACCAATGCATTTGTAAAAACTGAAGTAACTCAGCTTGTACAGGCAAATATAGTGGATGTGCGCAACATACCAGAAGCATTACCTTACTTTATCACCCCAAAGGCAGTTGATGATAATTCAGTGCTCTTGCAACAATTGCCTCATTGGGCTCCTTGTTCTATTACACAAGCTCTAGAGTTTCTTTCTCCTGCATACAAGGGTCATCCACGGGTCATGGCATACATTCTAAGGGTTCTGGAATCCTATCCTCCTGAACGAGTAACTTTTTTCATGCCACAGCTGGTGCAGTCGTTGCGACATGATGAAGGGAAATTGGTTGAAGGGTATTTGCTTAGAGCTGCTCAAAGAAGTGACATATTTGCCCATATTCTTATCTGGCATTTGCAGGGTGAGACTGTACCTGAGACAGGAAAAGACCCAAACAGTGGGAAGAATGGTTCATTTCTAGAACTGCTGCCAGCGGTAAGGCAGCGTATAATTGATGGTTTTAATCCAAAGGCACTTGACATATTTAAAAGAGAGTTTGATTTCTTTGACAAAGTTACATCCATCTCTGGTGTACTATTTCCACTCCCTAAAGAAGAACGCCGAGCTGGTATCCGGAGGGAGTTGGAGAAAATTGAAATGGATGGTGAGGACCTTTATTTACCGACAGCTCCTAACAAGCTTGTTAGGGGTATTCGAGTAGATAGTGGTATTCCCTTACAATCAGCTGCAAAAGTCCCAATCATGATAACTTTTAATGTAATTGATCGAGATGGGGATGAGAATGATGTAAAGCCACAAGCTTGCATTTTCAAGGTTGGAGATGACTGTAGACAAGATGTTCTTGCCCTTCAAGTAATAGCACTACTTAGAGATTTATTTGAAGCCGTTGGCTTAAATCTTTATCTATTTCCTTATGGTGTACTGCCTACTGGTCCTGAGAGAGGTATAATAGAGGTTGTGCCAAATACGCGCAGTAGAAGTCAGATGGGGGAAACAACTGATGGAGGTTTGTTTGAGATATTTCAGCAAGATTATGGGCCTGTTGGGTCTGCCAGTTTTGAGGCTGCACGCCAGAACTTTATCATTAGCAGTGCTGGTTATGCTGTTGCTAGTCTTTTGCTTCAACCAAAGGATAGGCACAATGGGAACCTTCTCTTTGATAATGTTGGGAGGCTTGTTCATATTGACTTCGGTTTCATCCTAGAAACTTCTCCGGGTGGGAATATGCGTTTTGAAAGTGCTCATTTTAAGCTGAGCCATGAGATGACACAATTACTAGATCCATCTGGTGTTATGAAGAGTGATACATGGAACCAGTTTTTAAGTTTGTGCGTGAAGGGGTACCTTGCTGCCCGTCGACGAATGGATGGGATCATCACTACTGTGTCATTAATGCTAGACAGTGGGTTACCTTGCTTCAGCAGGGGTGACCCGATTGGCAATCTTCGGAAGAGATTTCATCCGGAGATGAGTGAGCGTGAAGCAGCCAATTTCATGACCCATGTTTGTAAAGATGCTTATAATAAGTGGACCACTGCTGGCTATGACTTGATACAGTATCTGCAGCAAGGCATCGAGAAGTGA 6108 0.4592 MEALIELCDLIAQNPSLFSDKLSWICDKCPPPEYLSAGSPRVSRSQLNAVLAVARFLSNCPDSADLRPKSVVLEFLRSVPHSFTQSFWPHPFSLDSVASFFLDFIGYVSKAAQSSPDFAEELAAFAGEVVISAIGEQRSGIARAFLAALSQNFLPISSFDANRLVTCLIDQFAAPTVGPVPGMPREQLAAENSSAQSSPISVNHQSLTNYNDSPGNENASGSSSSVASKAADDVSTASSRGMVNGGNHVWRTGADQLAQNLGLNDGGLGAFSSGQQVVLFEEESVEFLERQEIAFKLIAHVLEKAHVEPALLEQVRLIGKKQIQSMSVFLKIRKRDWHEQGSLLKARINTKLSVYKAAVNLKIKSLSALDSDSRSVKRLVYEAVAILIDAAEACLLSGWRKLRLCEELFSSLLLGVAHIAIARGGQPLRILLIRLKPIVLNVCAQPDTWSNTHGGMFESVMKVSCQIIESCWNKERAPVDTYIMGLATSIRERNDYEEQDNQEKPAVPFVQLNVIHLFAELSAAVNKSELVDVLLPLFIESLEEGDASTPSLLRLRLLDAVSRMASLGFEKSYRETVVLMTRSYLNKLSSVGSAESKTEATEATTERVETLPAGFLLIASGLTSDRLRSDFRHRLLSLCSDVGLAAEAKSGRSGADFLGPLLPAVAAICSDFDPTLNVEPSLLKLFRNLWFYVALFGLAPPVQKTPVTTKSVSSTLNSVGSMGAISLQAVNGPYMWNVDWSSAVQRISQGTPPLVVSSVKWLEDELELNALHNPGSRQGSGNEKAALAQRAALSAALGGRVDVTAMTTISGVKATYLLAVAFLEIIRFSSNGGILTGGTTMDAARSAFTCVFEYLKTPNLMPAVFQCLAAIVHRAFETAVSWLEDRVSEIGHEAETRDSILTMHTCYLIKSLSQREDHIRDIAENLLTQLRDKFPQVLWDSPCIDSLLFSFNDDSSTTIINDPAWTATVRTLYQRIVREWIIKSVSSAPCTSQGLLQDKLCKANTWQRAQPTIDVVLLLSEIRIGTGKNDNWPIQTANIPAVTAAAAAASGANLKASESFNLDVISSGKCNQAAATVKCNHAGEIAGMRRLYNSIGGFQSSTAPSGLGLGAGLQRIISGAFPQQPQAEDDSFNGMLLNKFVRLLQQFVNIAEKGGEVVRSEFRDTCSQATVLLLSNLSSGSKSNVEGFSQLLRLLCWCPAYISTHDAMETGVFIWTWLVSAAPELGALVLAELVDAWLWTIDTKRGLFASEARYSGPAAKLRPHLSPGEPELQPETDPVEQIIAHRLWLGFLIDRFEAIRHQSVEQLLLFGRMLQGTTKLPWNFSHHPAASGTFFTLMLLGLKYCSCQFQGNLQKFQMGLQLLEDRIYRASLGWFSFEPEWYDTNYTNFAQCEAQSVSLFVQYLTNMKGDTVQVGSKGNGQENGNPLADVSDHHHPVWGQMGNYAAGREKRRQLLLMLCQHEADRLDVWAQPTNTKESSSRPKISADKWIEYTRTAFSVDPRLALSLASRFPTNAFVKTEVTQLVQANIVDVRNIPEALPYFITPKAVDDNSVLLQQLPHWAPCSITQALEFLSPAYKGHPRVMAYILRVLESYPPERVTFFMPQLVQSLRHDEGKLVEGYLLRAAQRSDIFAHILIWHLQGETVPETGKDPNSGKNGSFLELLPAVRQRIIDGFNPKALDIFKREFDFFDKVTSISGVLFPLPKEERRAGIRRELEKIEMDGEDLYLPTAPNKLVRGIRVDSGIPLQSAAKVPIMITFNVIDRDGDENDVKPQACIFKVGDDCRQDVLALQVIALLRDLFEAVGLNLYLFPYGVLPTGPERGIIEVVPNTRSRSQMGETTDGGLFEIFQQDYGPVGSASFEAARQNFIISSAGYAVASLLLQPKDRHNGNLLFDNVGRLVHIDFGFILETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSDTWNQFLSLCVKGYLAARRRMDGIITTVSLMLDSGLPCFSRGDPIGNLRKRFHPEMSEREAANFMTHVCKDAYNKWTTAGYDLIQYLQQGIEK* 2036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0121 2035 Gene3D - 1828 2023 IPR036940 GO:0016301
Gso4g0121 2035 PANTHER BNAA06G03180D PROTEIN 1 2034 - -
Gso4g0121 2035 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1778 1792 IPR018936 GO:0016301
Gso4g0121 2035 Pfam Phosphatidylinositol 3- and 4-kinase 1775 1834 IPR000403 -
Gso4g0121 2035 Pfam Phosphatidylinositol 3- and 4-kinase 1835 1982 IPR000403 -
Gso4g0121 2035 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1741 2019 IPR000403 -
Gso4g0121 2035 CDD PI4Kc_III_alpha 1735 2034 - -
Gso4g0121 2035 Gene3D - 1679 1827 - -
Gso4g0121 2035 Gene3D - 1483 1654 IPR042236 -
Gso4g0121 2035 PANTHER PHOSPHATIDYLINOSITOL KINASE 1 2034 IPR015433 GO:0046854|GO:0048015
Gso4g0121 2035 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 1512 1644 IPR001263 -
Gso4g0121 2035 ProSiteProfiles PIK helical domain profile. 1490 1667 IPR001263 -
Gso4g0121 2035 SMART pi3k_hr1_6 1775 2032 IPR000403 -
Gso4g0121 2035 SMART pi3k_hr2_4 1492 1685 IPR001263 -
Gso4g0121 2035 SUPERFAMILY Protein kinase-like (PK-like) 1679 2028 IPR011009 -
Gso4g0121 2035 Pfam PI4-kinase N-terminal region 295 1477 IPR045495 -
Gso4g0121 2035 SUPERFAMILY ARM repeat 359 949 IPR016024 -
Gso4g0121 2035 SUPERFAMILY ARM repeat 1482 1644 IPR016024 -
Gso4g0121 2035 MobiDBLite consensus disorder prediction 189 245 - -
Gso4g0121 2035 MobiDBLite consensus disorder prediction 183 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0121 Gso-Chr4 1051546 1070007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0121 1 2035 Acyl Lipid Metabolism Gene Families AT1G49340 73.317 0.0 3026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0121 K00888 - gmx:100777069 3909.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0121 4 1051546 1070007 Gso4g0121 4 1051546 1070007 ECH
Gso4g0121 4 1051546 1070007 Gso6g0108 6 1034914 1056512 GST