Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0104 ATGAGACTTGGATTTGCTTCTTGGAGATTCATCCCATGCACCCTGGTTGCCTTTTTGATTCTACAAGACAGTGGAGCTAGAAAGATAGCTACAACATCTGGGAAAGAAATTCAACTGAAGGAAGAAGTATCCTATGATTTGCAAAAGCTTGCAACAGAGGGTCTTGTACTTGACAGTATTATTCAGCTCGAAGGCGCTGATATAGAAAAGAAGAAGCATGTCCATAAAGATGATGATGAGGACGAGGACGATAGAGTGAAGAAAGGAATGGGATTTGACAAAGAAGAAGATGAGGAGGAGGATAAAGATGAACACAAAAAGATGGTTGGAAAGGATGTGCATGGTTATAAGCCATCTCACAAACACATGGACCTTGAACTGAATGTGTTCTTCACCCCAAATGATTTAAAGGTTGGGAAAATAATGCCCGTCTATTTTTCCAAGAAAAACTCCTCAACATCTCCAAAATTTCTGACCAGAGAAGAAGCTGACCAGATTCCTTTCTCATGCAAACACCTACCATCCCTTCTCAAATTCTTCTCCATCCCACAACACTCTCCCCAAGCCAAGGCAATGAAATATACCCTCAAACAATGTGAATTTGAACCCATGGAAGGAGAGACCAAGTTCTGTGCCACTTCGTTGGAGTCCTTGTTTGATTTTGCGCACTATCTGTTTGGGTCCAATGCACAATTCAAAGTTCTGACCACTGTCCATCTCACAAATTCAACAGCCCTGCTACAGAACTACACAATCTCAGAAGTGAAAGTGATTTCAGTTCCAAATGTTATAGGGTGTCACCCCATGCCTTACCCTTATGCAGTTTTTTACTGCCACAGTCAGCATAGTGACACCAATCTCTATGAGGTGATGGTAGAAGGTGAGAATGGAGGGAGAGTTCAAGCTGCAGCTATTTGCCACATGGACACCTCTAAGTGGGACCGGGACCACGTGTCCTTTCGTGTGCTCAAAGTTCAGCCGGGAACCTCACCTGTGTGTCACTTCTTCCCTCCTGATAATCTAGTCTGGGTGCCTTTGCCTCTGCCTCCATAA 1053 0.4368 MRLGFASWRFIPCTLVAFLILQDSGARKIATTSGKEIQLKEEVSYDLQKLATEGLVLDSIIQLEGADIEKKKHVHKDDDEDEDDRVKKGMGFDKEEDEEEDKDEHKKMVGKDVHGYKPSHKHMDLELNVFFTPNDLKVGKIMPVYFSKKNSSTSPKFLTREEADQIPFSCKHLPSLLKFFSIPQHSPQAKAMKYTLKQCEFEPMEGETKFCATSLESLFDFAHYLFGSNAQFKVLTTVHLTNSTALLQNYTISEVKVISVPNVIGCHPMPYPYAVFYCHSQHSDTNLYEVMVEGENGGRVQAAAICHMDTSKWDRDHVSFRVLKVQPGTSPVCHFFPPDNLVWVPLPLPP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0104 350 Pfam BURP domain 129 345 IPR004873 -
Gso6g0104 350 MobiDBLite consensus disorder prediction 71 107 - -
Gso6g0104 350 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 4 346 IPR044816 -
Gso6g0104 350 SMART BURP_2 128 346 IPR004873 -
Gso6g0104 350 ProSiteProfiles BURP domain profile. 130 346 IPR004873 -
Gso6g0104 350 PANTHER DEHYDRATION-RESPONSIVE RD22-LIKE PROTEIN 4 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0104 Gso-Chr6 1015426 1017070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0104 - - gmx:100789387 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0117 4 1032090 1033966 Gso6g0104 6 1015426 1017070 GST