Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0117 ATGAGACTTGGATTTGCTTCTTGGAGATTCATCCTATGCACCCTAGTTGTCTTTTTGATTCTACAAGACAGTGTAGCTAGAAAGATAGCTACAACATCTGGGAATGAAGTTCAACTGAAGGAAGTATCCTATGATTTGCAAAAGCTTGCAACAGAGGGTCTTGTACTTGACAGTATTATTCAGCTTGAAGGCGCTGATATAAAAAGGAAGAATAAGCATGTCCATAAAGACGAGGCTAGAGTGAAGAAAGGAATAGGATTTGACATAGAAGAAGAGGAGGATAAAAATGATCACAAAAAGATAGTTGGAAAGGATGTGCATGGTTATAAGCCATCTCATGAGGATCACAAACACATGGACCTTGAACTGAATGTGTTTTTCACCCCAAATGATTTGAAGGTTGGGAAAATAATGCCCATCTATTTTTCCAAGAAAAACTCCTCAACATCTCCAAAATTTCTGACCAGAGAAGAAGCTGATCAGATTCCTTTCTCATCAAAACACCTACCATCGCTTCTCAAATTCTTCTCCATCCCAAAACACTCTCCCCAAGCCAAGGCAATGAAATATACCCTCAAACAATGTGAATTTGAATCCATGGAAGGAGAGACCAAGTTCTGTGCCACTTCCCTGGAGTCCTTGTTTGATTTTGCACACTATCTGTTCGGGTCCAATGCACAATTCAAAGTTTTGACCACTGTTCATCTCACAAATTCAACAACCCTGCTACAGAACTACACAATCTCAGAAGTGAAAGTGATTTCAGTTCCAAATGTTATAGGGTGTCACCCCATGCCTTACCCTTATGCAGTTTTTTACTGCCACAGCCAGCATAGTGACACCAATCTCTATGAGGTGATGGTAGAAGGTGAGAATGGAGGGAGAGTTCAAGCTGCAGCTATTTGCCACATGGACACCTCTAAGTGGGACCGAGACCACGTGTCCTTTCGTGTGCTCAAAGTTGAGCCGGGAACCTCACCTGTGTGTCATTTCTTCCCTCCTGATAATCTAGTCTGGGTGCCTTTGCCTCTGGCTCCATAA 1041 0.4217 MRLGFASWRFILCTLVVFLILQDSVARKIATTSGNEVQLKEVSYDLQKLATEGLVLDSIIQLEGADIKRKNKHVHKDEARVKKGIGFDIEEEEDKNDHKKIVGKDVHGYKPSHEDHKHMDLELNVFFTPNDLKVGKIMPIYFSKKNSSTSPKFLTREEADQIPFSSKHLPSLLKFFSIPKHSPQAKAMKYTLKQCEFESMEGETKFCATSLESLFDFAHYLFGSNAQFKVLTTVHLTNSTTLLQNYTISEVKVISVPNVIGCHPMPYPYAVFYCHSQHSDTNLYEVMVEGENGGRVQAAAICHMDTSKWDRDHVSFRVLKVEPGTSPVCHFFPPDNLVWVPLPLAP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0117 346 Pfam BURP domain 125 341 IPR004873 -
Gso4g0117 346 PANTHER DEHYDRATION-RESPONSIVE RD22-LIKE PROTEIN 4 342 - -
Gso4g0117 346 ProSiteProfiles BURP domain profile. 126 342 IPR004873 -
Gso4g0117 346 SMART BURP_2 124 342 IPR004873 -
Gso4g0117 346 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 4 342 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0117 Gso-Chr4 1032090 1033966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0117 - - gmx:100806829 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0117 4 1032090 1033966 Gso4g0117 4 1032090 1033966 ECH
Gso4g0117 4 1032090 1033966 Gso6g0104 6 1015426 1017070 GST