Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0039 ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTACGAGGAAATGGGAAGCGAAGGGAAGCCTAGGGATGCAAAATCCAGGTTATTAAGTTTGTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAACTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTAACGTTGCCATACTCATTTTCCCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACGGCTTGCTGGGTGGCTGGACTGCTTACCTTATTAGCGCACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAATTTCAGGAACCACGTCATCCAGTGGTTTGAGGTTCTTGATGGGCTCCTCGGGAAGCACTGGAGAAACGTGGGCTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATCCAACTCATAGCTTGTGCAAGCAACATATATTACATAAATGATAATTTGGATAAGAGGAGTTGGACTTACATCTTTGGAGCATGCTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACTGTTGCCTCTCTCCTTCACGGCCAGGTGGAGGGGGTTAAGCATTCGGGTCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAATTCAAGGCCATATACTTACTTGCTACCCTGTATGTGATGACATTGACTCTTCCATCGGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTTCTCTCCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCATGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATACACGAGTGTAGGAGCCTGTGCAAGCGTGCTTTGGCGAGATTGCCGGTGGTGATCCCGATATGGTTTTTGGCCATAGTTTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTACTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCACCCTCTGCCCGACAGAATGCGGTGGAGCAACCTCCGAGGTTGGTGGGAAGATGGGTGGGTGCGTACACGATCAACTTATTCGTGGTGGTGTGGGTTCTGGTGGTAGGCTTTGGATTCGGAGGATGGGCAAGTATGGTCAACTTCATTCACCAGATTGACACATTCGGTTTCTTCACAAAATGTTACCAGTGCCCCACACCCACTTCCGTGGAGCCACCACACCTGAACGCCACCGCGCTCTCCCCTCGTGCTCACTGA 1446 0.4806 MASEKEVETVIVGNYEEMGSEGKPRDAKSRLLSLLWHGGSVYDAWFNCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLLGGWTAYLISALYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRSWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPSARQNAVEQPPRLVGRWVGAYTINLFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPTPTSVEPPHLNATALSPRAH* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0039 481 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Gso6g0039 481 PANTHER OS05G0424000 PROTEIN-RELATED 3 466 - -
Gso6g0039 481 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0039 Gso-Chr6 407072 411667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0039 4 474 Organic Solute Cotransporters AT2G21050 84.454 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0039 K13946 - gmx:100806531 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0043 4 417694 422426 Gso6g0039 6 407072 411667 GST