Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0043 ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAAATGGAAAGTGAAGGGAAGCCTAGGGATGCAAAATCCAGGTTATTAAGTTTCTTGTGGCATGGGGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTAACGTTGCCATACTCTTTTTCCCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACGGCTTGCTGGGTGGCTGGACTGCTTACCTCATTAGCACACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAATTTCAGGAACCATGTCATTCAGTGGTTTGAGGTTCTTGATGGGCTCCTCGGGAAACACTGGAGAAACGTGGGCTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATCCAACTCATAGCTTGCGCAAGCAACATATATTACATAAATGATAATTTGGATAAGAGGACTTGGACTTATATCTTTGGAGCATGTTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCGGGCCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAATTCAAGGCCATATACTTACTGGCTACCCTGTATGTGATGACATTGACTCTCCCATCGGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTTCTCTGCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTCTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCAAGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATACACGAGTGTAGGAGCCTGTGCAAGCGTGCATTGGCGAGATTGCCAGTGGTGATCCCAATATGGTTTTTGGCCATAGTTTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTTCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCACCCGCTGCCCGACGGAATGCGGTGGAGCAACCTCCGAGGTCGGTGGGAAGATGGGTGGGTGCGTACACCATGAACGTATTTGTGGTGGTGTGGGTTCTAGTGGTAGGCTTTGGATTCGGAGGATGGGCGAGTATGGTCAACTTCATACACCAGATTGACACATTCGGTTTCTTCACCAAATGTTACCAATGCCCCACACCCACTTCCATCAACTCAACCGCGCCTTCCCCTCGTGCTCACTAA 1431 0.4745 MASEKEVETVIVGNYEEMESEGKPRDAKSRLLSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLLGGWTAYLISTLYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFASTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARRNAVEQPPRSVGRWVGAYTMNVFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPTPTSINSTAPSPRAH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0043 476 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
Gso4g0043 476 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Gso4g0043 476 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0043 Gso-Chr4 417694 422426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0043 4 460 Organic Solute Cotransporters AT2G21050 87.309 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0043 K13946 - gmx:100794079 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0043 4 417694 422426 Gso4g0043 4 417694 422426 ECH
Gso4g0043 4 417694 422426 Gso6g0039 6 407072 411667 GST