Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0027 ATGGCTGTTTCGGCTATCACTGGAGCGAGGCTAACCCTAGGGATGTCTCTTTCCTCTTCCACGCGATCACGAACCGTCGCAATGGCCGTATCTATCGACCCCAAGACCGATAACAAACTCACTCTTACCAAGTCCGAGGAAGCTTTCGCTGCGGCCAAGGAGCTGATGCCTGGAGGCGTGAACTCCCCAGTTCGTGCCTTCAAATCCGTGGGTGGTCAACCAATTGTGATTGATTCAGTCAAAGGGTCTCGTATGTGGGATATCGATGGCAATGAGTACATTGACTACGTTGGTTCCTGGGGTCCTGCAATCATTGGTCACGCTGATGATCAGGTGCTTGCAGCTCTGGGTGAAACCATGAAGAAAGGAACCAGCTTTGGTGCACCCTGTCTGCTGGAAAACACTTTGGCAGAGCTGGTTATCGATGCCGTCCCCAGCATTGAAATGGTTCGGTTTGTCAATTCAGGCACTGAAGCTTGCATGGGTGCGCTCCGTCTGGCCCGTGCTTATACCGGAAGAGAGAAGATCATCAAGTTTGAGGGCTGTTACCATGGCCATGCTGATCCTTTTCTTGTTAAGGCAGGTAGTGGAGTTGCCACCTTAGGACTTCCTGATTCTCCCGGTGTCCCCAAAGCTGCCACTTTTGAAACCCTTACAGCCCCCTACAATGACACCGAGGCCATTGAGAAACTCTTCGAGGCCAACAAAGGAGAAATTGCCGCAGTTTTCCTCGAACCTGTTGTTGGAAACGCTGGTTTCATTGTTCCTAAGCCTGATTTTCATAGTTTCTTGCGCAAGATCACCAAGGAGAACAATACCCTTCTTGTGTTTGATGAAGTCATGACTGGATTTCGTTTGTCATATGGAGGTGCTCAAGAGTATTTTGGCATAACTCCAGATATAACAACTCTAGGAAAGATCATTGGTGGAGGTCTGCCGGTAGGCGCTTATGGAGGGAGGAGGGATATTATGGAGAAGGTGGCACCAGCTGGCCCAATGTATCAGGCTGGGACCTTGAGTGGGAACCCTTTGGCCATGACTGCAGGCATAGAGACCCTGCAGCGTATTAAGGAGCCAGGAACTTACGAGTACTTGGACAAAATCACTGGTGAGCTTGTTGAGGGCATCATCGAAGCTGGGAAGCGGGCAGGCCATGCAATATGTGGTGGGCATATAAGGGGGATGTTTGGGTTTTTCTTCACAGAAGGACCAGTGTATAATTTTGCAGATGCCAAAAAGAGTGATACGGCCAAGTTTGCTAGGTTCTTTTGGGGAATGCTGGCGGAAGGTGTCTATTTGGCACCTTCCCAGTTTGAGGCTGGCTTCACCAGCTTGGCACATACTTCTGATGACATAAAAAAGACGATAGCCGCTGCTGAGAAGGTTTTCAGGGAGATCTGA 1401 0.4982 MAVSAITGARLTLGMSLSSSTRSRTVAMAVSIDPKTDNKLTLTKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAELVIDAVPSIEMVRFVNSGTEACMGALRLARAYTGREKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATFETLTAPYNDTEAIEKLFEANKGEIAAVFLEPVVGNAGFIVPKPDFHSFLRKITKENNTLLVFDEVMTGFRLSYGGAQEYFGITPDITTLGKIIGGGLPVGAYGGRRDIMEKVAPAGPMYQAGTLSGNPLAMTAGIETLQRIKEPGTYEYLDKITGELVEGIIEAGKRAGHAICGGHIRGMFGFFFTEGPVYNFADAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0027 466 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 14 464 - -
Gso6g0027 466 Pfam Aminotransferase class-III 74 400 IPR005814 GO:0008483|GO:0030170
Gso6g0027 466 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 44 466 IPR004639 GO:0033014|GO:0042286
Gso6g0027 466 Gene3D Aspartate Aminotransferase, domain 1 47 459 IPR015422 GO:0003824
Gso6g0027 466 CDD OAT_like 49 463 IPR005814 GO:0008483|GO:0030170
Gso6g0027 466 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 44 465 IPR004639 GO:0033014|GO:0042286
Gso6g0027 466 SUPERFAMILY PLP-dependent transferases 42 465 IPR015424 -
Gso6g0027 466 PANTHER BNAA09G06670D PROTEIN 14 464 - -
Gso6g0027 466 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 275 311 IPR005814 GO:0008483|GO:0030170
Gso6g0027 466 Gene3D - 110 358 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0027 Gso-Chr6 252700 254670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0027 K01845 - gmx:547795 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0024 4 234895 236849 Gso6g0027 6 252700 254670 GST