Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0018 ATGTCGATCTTGTCCGTTCCGTCACCAACACAGCGTTGTTCCATTTCGATTTCTCGGCTGCCATTGCCATTGCCATTGCCGTTTCAATTGCAAGTGAGAAGAAGAGCAAAAGGGGGAAAAGTGGTAATGAGCATGGAGGCAGGTATTGGAGTGATGGGCACCAAGTTGGGTATGATGAGCTATTTCGAATCCGACGGAGAGGTTGTTCCTGTCACTGTCGTGGGTTTCAAAGAAGGCAACATCGTCACCCAGATCAAAACTGAGGCCACCGATGGATACGACGCCGTCCAGGTTGGTTACCGAAGGGTCAGAGACCGCAAATTGACCAAACCCGAAATGGGTCATCTCCATAAGGTCGGCGCCATTCCCATGCGCCATCTTCAGGAGTTCCGTCTTCAAGCCATCGATGGCTTCGACCTTAATCAGCGCCTTCTTTTTGATGAAACTTTCAAGGAGGGTGATCTTGTTGATGTCTCTGGCACCACCATTGGCAAGGGTTTCCAAGGTGGAATCAAGCGTCATAACTTCAAAAGGGGTCCAATGACACATGGTTCCAAGAGTCACCGACAACTAGGATCAATTGGTGCTGGAACCACGCCTGGTCGTGTTTACAAGGGGAAGAAGATGCCTGGTAGGATGGGAGGAACCAAGAGGAAGATCAGAAAGCTTAAGATTGTCAAAATTGATAAAGATCTTAATGTCCTCATGATCAAAGGTGCTCTCCCTGGTAAGCCAGGCAATCTTCTAAGGATAACTCCTGCCAAGATTGTCGGCAAGAACATTCCAAAGAATTAG 795 0.483 MSILSVPSPTQRCSISISRLPLPLPLPFQLQVRRRAKGGKVVMSMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVLMIKGALPGKPGNLLRITPAKIVGKNIPKN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0018 264 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 43 263 - -
Gso6g0018 264 MobiDBLite consensus disorder prediction 178 216 - -
Gso6g0018 264 Hamap 50S ribosomal protein L3 [rplC]. 48 255 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso6g0018 264 Pfam Ribosomal protein L3 142 230 IPR000597 GO:0003735|GO:0005840|GO:0006412
Gso6g0018 264 TIGRFAM L3_bact: 50S ribosomal protein uL3 50 251 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso6g0018 264 ProSitePatterns Ribosomal protein L3 signature. 150 173 IPR019926 -
Gso6g0018 264 Gene3D Translation factors 176 256 - -
Gso6g0018 264 Gene3D - 81 138 - -
Gso6g0018 264 PANTHER 50S RIBOSOMAL PROTEIN L3 43 263 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso6g0018 264 SUPERFAMILY Translation proteins 49 260 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0018 Gso-Chr6 190639 191783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0018 K02906 - gmx:100809897 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0018 4 190998 192757 Gso6g0018 6 190639 191783 GST