Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0018 ATGTCGATCTTTTCTATTCCCTCACCAACGTACCGTTGTTCAATTTCAATTTCAATTTCTCGGCAGCCATTGCCATGTTCTTTCACGGCTCAAGTGAGAAGAAGAGGGAAAGGGAAAGTGGTAATGAGCATGGAGGCAGGCATTGGAGTGATGGGCACCAAGTTGGGTATGATGAGCTATTTCGAATCCGACGGAGAGGTTGTTCCTGTCACTGTCGTGGGTTTCAAAGAAGGCAACATCGTCACCCAGATCAAAACTGAGGCCACCGATGGATACGACGCCGTCCAGGTTGGTTACCGAAGGGTCAGAGATCGCAAATTGACCAAACCCGAAATCGGTCATCTCCAGAAGGTCGGCGCCATTCCCATGCGCCATCTTCAGGAGTTCCGTCTTCAAGCCGTCGATGGCTTCGACCTTAACCAGCGCCTTCTTTTTGATGAAATTTTCAAGGAGGGTGATCTTGTTGATGTCTCTGGCACCACCATTGGCAAGGGTTTCCAAGGTGGAATCAAGCGTCATAACTTCAAAAGGGGTCCAATGACCCATGGTTCCAAGAGTCACAGACAACTAGGATCAATTGGTGCTGGAACCACACCTGGTCGTGTGTACAAGGGAAAAAAGATGCCTGGCCGGATGGGAGGAACCAAGAGGAAGATAAGAAAGCTTAAGATTGTAAAAATTGATAAAGATCTTAATGTGGTCATGATCAAAGGTGCTGTCCCTGGTAAGCCAGGCAATCTTCTAAGGATAACTCCAGCCAAGATTGTCGGCAAGAACATTCCAAAGAATTAG 792 0.476 MSIFSIPSPTYRCSISISISRQPLPCSFTAQVRRRGKGKVVMSMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEIGHLQKVGAIPMRHLQEFRLQAVDGFDLNQRLLFDEIFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0018 263 ProSitePatterns Ribosomal protein L3 signature. 149 172 IPR019926 -
Gso4g0018 263 PANTHER 50S RIBOSOMAL PROTEIN L3 42 262 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso4g0018 263 TIGRFAM L3_bact: 50S ribosomal protein uL3 49 250 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso4g0018 263 MobiDBLite consensus disorder prediction 177 215 - -
Gso4g0018 263 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 42 262 - -
Gso4g0018 263 Gene3D Translation factors 175 255 - -
Gso4g0018 263 SUPERFAMILY Translation proteins 48 259 IPR009000 -
Gso4g0018 263 Hamap 50S ribosomal protein L3 [rplC]. 47 254 IPR019927 GO:0003735|GO:0005840|GO:0006412
Gso4g0018 263 Gene3D - 80 137 - -
Gso4g0018 263 Pfam Ribosomal protein L3 141 229 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0018 Gso-Chr4 190998 192757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0018 K02906 - gmx:100802392 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0018 4 190998 192757 Gso6g0018 6 190639 191783 GST