Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1732 ATGGGCGAGGAAGAGAAAAAATTAGAAGAAAGCAAAGAGGAGAACAAAAAAGCAGAGGAACCAAAGAAGGAAGAAGAGAAGAAAGAGGAGAGAAAAACTGAGGAATCAAAAGATGACAAAGAATCTAAGGAGAAAGTTGCGCCGTCAGAAATCGTGCTTAAAGTGTTCATGCATTGTGAAGGTTGTGCTCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGGGTCGAAGATATACTCACAGATTGCAAGTCTCACAAGGTGGTTGTGAAAGGAGAAAAAGCGGATCCGCTGAAGGTTCTAGAGAGACTACAGAAGAAAAGCCATAGAAAGGTTGAACTTCTCTCTCCGATCCCAAAACCACCCACGGAAGAGGAGAAAAAACCCCAAGAGGAACAAGAGAAGCCCAAACCAGAGGAGAAGAAAGAAGAGCCTCGGGTTATCACAGTTGTTCTGAAAGTTCACATGCATTGCGAAGCTTGCGCCCAGGAAATCAAGAGACGCATCGAGAAAATGAAAGGGGTTGAATCAGCGGAAGCGGATCTGAAGAAGTCGGAGGTAAGCGTGAAGGGGGTGTTCGAGACAGCGAAGCTGGTGGAGCACGTGTACAAGAGGACAGGGAAGCATGCAGTGATAGTGAAGCAAGAGGCAGAGAAGAAAGAAGAAGAGAAGAAAGCAGAGGAAGAAGTTGAGAAGAAAATGGAGAAAGGGAGTGGCGAGGGAGAAGAAAACAAGGAGAAAAAAGAAGGAGGAGAGGGTGAAGCCAAAGCAGAAGAGGCATCCACAGTGTTGGAGGTGAAAAAGAGTGAGTATTATTACAACCCACCACCAAGGTATGGTGGCATGGAGTTCTATGCATACTCTGGACCAGCGTACCCTCCTCAGATCTTCAGTGATGAGAACCCCAATGCCTGCTCTGTCATGTAA 927 0.4671 MGEEEKKLEESKEENKKAEEPKKEEEKKEERKTEESKDDKESKEKVAPSEIVLKVFMHCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERLQKKSHRKVELLSPIPKPPTEEEKKPQEEQEKPKPEEKKEEPRVITVVLKVHMHCEACAQEIKRRIEKMKGVESAEADLKKSEVSVKGVFETAKLVEHVYKRTGKHAVIVKQEAEKKEEEKKAEEEVEKKMEKGSGEGEENKEKKEGGEGEAKAEEASTVLEVKKSEYYYNPPPRYGGMEFYAYSGPAYPPQIFSDENPNACSVM* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1732 308 MobiDBLite consensus disorder prediction 216 261 - -
Gso5g1732 308 MobiDBLite consensus disorder prediction 1 48 - -
Gso5g1732 308 CDD HMA 151 210 IPR006121 GO:0046872
Gso5g1732 308 Gene3D - 47 120 - -
Gso5g1732 308 ProSiteProfiles Heavy-metal-associated domain profile. 156 212 IPR006121 GO:0046872
Gso5g1732 308 Gene3D - 145 213 - -
Gso5g1732 308 SUPERFAMILY HMA, heavy metal-associated domain 52 107 IPR036163 GO:0046872
Gso5g1732 308 Coils Coil 210 237 - -
Gso5g1732 308 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 308 IPR044577 GO:0046872
Gso5g1732 308 SUPERFAMILY HMA, heavy metal-associated domain 146 215 IPR036163 GO:0046872
Gso5g1732 308 CDD HMA 57 113 IPR006121 GO:0046872
Gso5g1732 308 ProSiteProfiles Heavy-metal-associated domain profile. 57 113 IPR006121 GO:0046872
Gso5g1732 308 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 308 - -
Gso5g1732 308 Coils Coil 1 43 - -
Gso5g1732 308 MobiDBLite consensus disorder prediction 110 144 - -
Gso5g1732 308 Pfam Heavy-metal-associated domain 152 208 IPR006121 GO:0046872
Gso5g1732 308 Pfam Heavy-metal-associated domain 53 107 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1732 Gso-Chr5 40641802 40643616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1732 - - gmx:100808454 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1732 5 40641802 40643616 Gso8g0093 8 900177 902175 GST
Gso5g1732 5 40641802 40643616 Gso4g1665 4 46526383 46528569 PCT
Gso5g1732 5 40641802 40643616 Gso6g1420 6 14133385 14135674 PCT
Gso4g1665 4 46526383 46528569 Gso5g1732 5 40641802 40643616 PCT
Gso6g1420 6 14133385 14135674 Gso5g1732 5 40641802 40643616 PCT