Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1665 ATGGGAGAGGAGGAAAAGAAACCAGAGGAACCCATGGCAAAGGAGAAAAACCCAGAGGAAGAAGCAACCCAAGAGAAAAAACCGGAGCAAGAGTCCAAAGAGGAAGTTGCTGCTGCTGCTGCTGCTCCGCCACCGCCACCGCCACCGCCCGAGATTGTGCTCAAAGTGTTCATGCATTGCGAGGGTTGCGCCCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGTGTCGACGATGTTGTCACCGATTGCAAATCTCACAAGGTGGTCGTTAAGGGAGAGAAAGCGGATCCGCTCAAGGTTTTGGAGAGAATACAGAGGAAGAGTCACAGACAGGTCGAGCTTCTTTCTCCGATCCCGAAACCTCAAGAGGAGAAGAAGGTCCAAGAGGAAGAGAAGCCCAAGCCCAACCCCGAAGAGAAGAAAGAAGAGCCTCAGATTGTGACGGTTCTGAAAGTTCACATGCATTGCGAAGCTTGCTCTCAGGAAATCAAGAGACGCATACAGAGAATGAAGGGAGTGGAATCAGCAGAACCCGATCTGAAGAACTCACAAGTGAGCGTGAAGGGGGTGTACGATCCAGCAAAGTTGGTTGAGTACGTTTACAAGAGAACCGGGAAGCACGCAGTGATAGTGAAGCAAGAGCCAGAAAAGAAAGAGAAAGTGGAGGAAGCAAAAGAGGAGAAGAAAGAGGAAGAGAAGAAGAGTGGTGGTGAAGGAGAAGAAAACAAAGAGAAGAAGGAAGAAGAAGCCAAAGTAGAGGAAGCAACAACACCAGCAACTACTGAAGACACCAACAAGGTTGTTCCAGAGGTTAAGATTAATGAATACTTCTATAACCCACCAAGGTATGGCATGGAGGTGTATGCATATCCTGCACACCCTGCGTATTTCCATTCCTACCCTCCCCAGATGTTCAGCGATGAGAACCCAAATGCCTGCACTGTCATGTAG 954 0.4937 MGEEEKKPEEPMAKEKNPEEEATQEKKPEQESKEEVAAAAAAPPPPPPPPEIVLKVFMHCEGCARKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVELLSPIPKPQEEKKVQEEEKPKPNPEEKKEEPQIVTVLKVHMHCEACSQEIKRRIQRMKGVESAEPDLKNSQVSVKGVYDPAKLVEYVYKRTGKHAVIVKQEPEKKEKVEEAKEEKKEEEKKSGGEGEENKEKKEEEAKVEEATTPATTEDTNKVVPEVKINEYFYNPPRYGMEVYAYPAHPAYFHSYPPQMFSDENPNACTVM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1665 317 MobiDBLite consensus disorder prediction 1 52 - -
Gso4g1665 317 MobiDBLite consensus disorder prediction 120 146 - -
Gso4g1665 317 Gene3D - 49 121 - -
Gso4g1665 317 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 317 - -
Gso4g1665 317 CDD HMA 58 114 IPR006121 GO:0046872
Gso4g1665 317 CDD HMA 150 209 IPR006121 GO:0046872
Gso4g1665 317 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 317 IPR044577 GO:0046872
Gso4g1665 317 Coils Coil 212 242 - -
Gso4g1665 317 MobiDBLite consensus disorder prediction 216 267 - -
Gso4g1665 317 SUPERFAMILY HMA, heavy metal-associated domain 53 108 IPR036163 GO:0046872
Gso4g1665 317 MobiDBLite consensus disorder prediction 216 257 - -
Gso4g1665 317 Pfam Heavy-metal-associated domain 54 108 IPR006121 GO:0046872
Gso4g1665 317 Pfam Heavy-metal-associated domain 151 207 IPR006121 GO:0046872
Gso4g1665 317 Gene3D - 144 212 - -
Gso4g1665 317 ProSiteProfiles Heavy-metal-associated domain profile. 58 114 IPR006121 GO:0046872
Gso4g1665 317 SUPERFAMILY HMA, heavy metal-associated domain 147 211 IPR036163 GO:0046872
Gso4g1665 317 MobiDBLite consensus disorder prediction 110 146 - -
Gso4g1665 317 MobiDBLite consensus disorder prediction 1 34 - -
Gso4g1665 317 ProSiteProfiles Heavy-metal-associated domain profile. 155 201 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1665 Gso-Chr4 46526383 46528569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1665 - - gmx:100787932 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1665 4 46526383 46528569 Gso6g1420 6 14133385 14135674 GST
Gso5g1732 5 40641802 40643616 Gso4g1665 4 46526383 46528569 PCT
Gso8g0093 8 900177 902175 Gso4g1665 4 46526383 46528569 PCT
Gso4g1665 4 46526383 46528569 Gso5g1732 5 40641802 40643616 PCT
Gso4g1665 4 46526383 46528569 Gso8g0093 8 900177 902175 PCT