Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1629 ATGTCGAATCCGGATCAGACAGTACTGAATCGGCGGCCATCAAGAAGCGCCGCGACGACGACGTTTTCGCTGGAGGTATTCGACAACGAAGTCGTGCCTTCCGCACTCGCTTCCATTTCTCCCATTCTCAGAGTCGCCAACGAAATTGAAACCGAGCGCCCCAGGGTTGCCTATCTCTGCAGGTTCTATGCCTTCGAAAAAGCGCACAGGCTAGATCAGAGTTCTAGCGGGCGTGGCGTCAGGCAGTTTAAGACAATGCTGCTACAGCGATTGGAGAGGGACAATCCAACTAGTCTTGCCTCTCGGGCTAAGAAGACAGATGCGAGAGAAATTCAATCTTACTATCAGCAATATTATGAACATTATGTCAGAACTCTCGACCAAGCGGATCAAGCAGACAGAGCCCAGCTTAGCAAAGCTTACCAGACTGCTGGGGTTCTATTCGAAGTGCTTTGTGCCGTTAATAAGACTGAGAAGGTCGAAGAAGTTGCTCCTGAGATTATCGCGGCAGCTAGAGATGTCCAGGAGAAGACGGAGATTTATACGCCTTACAATATTCTTCCTCTGGATGCTGCTGGTGCTTCTGTGCCCGTTATGCAATTTGAAGAGATTAAGGCTGCTGTTTCTGCACTTTGGAATACTCGTGGCTTGAACTGGCCTAATTCATTTGAGCAACAGAGGCAGAAAACTGGAGATTTAGACATGCTTGATTGGCTTAGAGCCATGTTTGGCTTTCAGAGGGACAGCGTTAGGAATCAGAGAGAGCATCTGATTTTGCTTCTTGCTAACTCTCATATAAGGCTACACCCTAAACCCGAGCCTTTCAACCTGCTCGATGATCGTGCTGTTGATTCAGTGATGAAAGATCTCTTCAAGAATTACAAATCATGGTGCAAATTCTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAAAGGAAGTTGCTTTATATGGGCTTGTATCTTCTCATCTGGGGTGAAGCATCCAATGCTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCACAACATGGCATATGAACTCCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTATAACTCCCCTGTACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCAGACATGGAAAAGCTCCGCACTCAGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCATCTGATTGCTTTTCTCTAGGATGGCCCATGCGTGATGATGGCGAATTCTTTAAATCAACAAGTGATTTGACACAGGGAAGAAATGGTGTGCCAAGAAAATATGGAAAAACTGGCAAATCAAATTTTGTCGAGACACGAACATTCTGGCACATCTTCCGCAGCTTTGACCGTATGTGGACATTTTTTATACTGGGTTTGCAGGTGATGTTCATTATTGCTTGGGAAGGGATTTCACTGACGGATATATTTCAGAAGGATGTCTTATATAATCTATCTAGTATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACGTGGTCCTGAACTTTCCAGGCTATCATCGATGGAAATTCACTGAAGTGCTAAGAAATATTCTTAAAGTCTTTGTCAGTCTTTTTTGGGTTATCATTCTTCCACTCTTCTATGTTCATTCCTTCAAGGGTGCACCTGAGGGTCTAAAGCAGTTGCTTTCCTTTTTCAAACAAATAAAAGGCATTCCGGCATTTTACATGCTAGCAGTTGCATTATATTTGCTTCCGAATTTACTAGCAGCTGTTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCTGACTGGCACATAGTTAGATTCTTCTTATGGTGGTCTCAGCCAAGCATCTATGTTGGAAGAGGAATGCATGATAGTCAATTTGCTCTTATGAAGTACACTATATTCTGGTTGTTGCTTTTGACATGTAAATTTTTATTCAGCTTTTTTGTCCAGATAAAACCTCTAGTTAGGCCAACAAAGGACATAATGAGCATTCGGCATGTTAATTATGGTTGGCATGCATTTTTTCCCAATGCTCGAAATAACTATAGCGCAGTAGTTGCACTCTGGGCTCCTGTACTTTTGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACTTTGTACGGTGGTCTTGTTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGAGAATGCTGAGATCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATGCTTGGTTCCTTCTGATAAGAAGCAAAAAGGAAGATTCTCTTTCTCAAAGCAATTTGCTGAGATTACTGCAAGCAAAAGAAATGAAGCTGCCAAATTTGCACAATTATGGAATGAGATTATTTGCAGTTTTCGCGAGGAAGATCTCATAAGTGACAGGGAGATGGATCTTTTGCTAGTTCCTTACTCATCGGGTCATAATCTGAAAATAATTCAGTGGCCACCATTTTTGCTTACGAGCAAGATTACTGTAGCACTGGATATGGCATCTCAGTTTCGAGGGAGGGACTCTGATCTTTGGAAGCGCATATGTGCTGATGAATATATGAAATGTGCTGTGATTGAATGCTATGAATCCTTTAAACATGTTCTACATGATTTAGTGATAGGAGAAACTGAAAAAAGTATAATTTCCTCTATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACACTTCTTACAAATTTCCGTATGGGCTTTCTACCCTCCCTTTGTAAGAAGTTCGTGGAGCTTGTGGAAATCATGAAAAATGGAGATCCATCCAAGCAGGGTACAGTGGTGGTATTGCTGCAAGACATGTTAGAAGTGGTTACCGATATGATGGTGAATGAAATCAGTGAATTGGCAGAACTCAATCAAAGTAGTAAGGATGCCGGACAAGTTTTTGCCGGTACAGAGGCAAAACCTGCTATACTATTCCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATTAGGCGCCTTTATCTACTCTTGACTGTGAAGGAATCTGCTGTTGAAGTTCCAACAAACAGCGAAGTACGCAGAAGGGTTTCATTCTTTACCAATTCATTGTTCATGGATATGCCACGTGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATACTCTAAGAATGACATTGAGGTTGAGAATGAAGATGGTGTGTCAATCATATATTACCTTCAAAAGATCTTCCCTGAGGAATGGAATAACTTCTTGGAGCGACTTGAGTGTAAGAAAGATAGTGATATATGGGAGAAAGAGGAAAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACACTTTGTAGGACAGTTAGGGGAATGATGTACTACCGCCGAGCAATAAAGCTCCAGGCATTTCTTGATATGGCTTCCGAACAAGAGATATTTGATGGCTATAAAGCTATTGCTGTTCCATCTGAGGAAGAAAAAAAGAGTCATAGATCCTTATATGCCAATATAGAGGCTATGGCTGACTTGAAATTCACATACGTTGCAACCTGTCAGAACTATGGGAATCAGAAGCGTTGTGGCGACCGTCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGCTGGCAAAATACAGAAAGTTTATTATTCTGTATTGATCAAAGCTGTGGACAATCTTGACCAAGAAATATATCGAATAAAACTTCCGGGTCCAGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAAGCTCTTCAGACTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGAGTACGCCCACCCACCATACTAGGTGTTCGTGAGCATATTTTCACTGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGCCAAAGAGTTCTTGCTAGACCGCTAAAGGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATTTTCCATTTTACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTTAACTCAACACTAAGACGTGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGACACTAAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACCGTTGGATTTTATGTCAGCTCGATGTTAGTGGCCATCACGGTTTATGCTTTCCTCTATGGCAGATTTTACCTGTCATTGAGTGGATTGGAGGAGGCAATAATTAAGATAGCCAGGAAAAAGGGAGATGATCCATTAAAGGCAGCAATGGCTTCCCAATCCCTTGTTCAAATAGGTCTTCTGATGACTCTTCCCATGGTTATGGAAATTGGACTAGAGAGAGGATTCAGAACTGCACTAAGTGACATCATAATAATGCAGCTGCAGCTAGCTCCCGTTTTCTTCACTTTCTCACTAGGGACTAAGATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAATACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAGAGGTTTGCAGACAACTACAGGATGTATTCTAGGAGTCACTTTGTAAAAGGGATAGAGATTGCTATACTGCTTATATGTTATGGGCTTTATGGATCAGCAACTTCTGATTCAACATCATATGCCCTTCTGTCATTATCAATGTGGTTTTTGGCATGTTCTTGGTTGTTCAGTCCTTTCCTTTTTAACCCATCAGGATTCGAGTGGCAGAAGATAGTTGAGGATTGGGAAGATTGGGCAAAATGGATTAGTAGTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAGCAGGAACATCTGCAGCACACTGGCATTTGGGGGAGGATTTGGGAAGTCATTCTTGCCCTGCGTTTCTTTGTCTATCAGTATGGGATTGTATATCATCTTCATGTTGCTAGAGGTGACAAGAGCATCTCGGTTTATGGTCTGTCCTGGTTAGTCGTAGTGGCTGTCATAGTCATCTTGAAGATAGTGTCCATGGGGAGCAAGACGTTCAGTGCAGATTTCCAGCTGATGTTTCGTCTCCTCAAATTGTTTCTGTTTATTGGAACCGTTGTCATCCTAACATTGATGTTTGCCCTACTTAGTTTCACAGTTGGTGACATCTTTGCGAGCCTCCTAGCCTTTATGCCCACAGGTTGGGCATTTATACAGATAGCTCAAGCATGTAGGCCATTGGTGAAGGGAATTGGAATGTGGGGGTCTATCAAAGCGTTATCGAGAGGGTATGAATACGTGATGGGAGTGCTTATCTTTGCACCAGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGACTGTTATACAACCAAGCTTTCAGCCGAGGGCTACAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAATAA 5736 0.424 MSNPDQTVLNRRPSRSAATTTFSLEVFDNEVVPSALASISPILRVANEIETERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTMLLQRLERDNPTSLASRAKKTDAREIQSYYQQYYEHYVRTLDQADQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDAAGASVPVMQFEEIKAAVSALWNTRGLNWPNSFEQQRQKTGDLDMLDWLRAMFGFQRDSVRNQREHLILLLANSHIRLHPKPEPFNLLDDRAVDSVMKDLFKNYKSWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEASNARFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYRVIEKEAKKSRHGKAPHSAWCNYDDLNEYFWSSDCFSLGWPMRDDGEFFKSTSDLTQGRNGVPRKYGKTGKSNFVETRTFWHIFRSFDRMWTFFILGLQVMFIIAWEGISLTDIFQKDVLYNLSSIFITASILRLLQSILDVVLNFPGYHRWKFTEVLRNILKVFVSLFWVIILPLFYVHSFKGAPEGLKQLLSFFKQIKGIPAFYMLAVALYLLPNLLAAVLFLFPMLRRWIENSDWHIVRFFLWWSQPSIYVGRGMHDSQFALMKYTIFWLLLLTCKFLFSFFVQIKPLVRPTKDIMSIRHVNYGWHAFFPNARNNYSAVVALWAPVLLVYFMDTQIWYAIFSTLYGGLVGAFDRLGEIRTLRMLRSRFQSLPGAFNTCLVPSDKKQKGRFSFSKQFAEITASKRNEAAKFAQLWNEIICSFREEDLISDREMDLLLVPYSSGHNLKIIQWPPFLLTSKITVALDMASQFRGRDSDLWKRICADEYMKCAVIECYESFKHVLHDLVIGETEKSIISSIIKEVESNISKNTLLTNFRMGFLPSLCKKFVELVEIMKNGDPSKQGTVVVLLQDMLEVVTDMMVNEISELAELNQSSKDAGQVFAGTEAKPAILFPPVVTAQWEEQIRRLYLLLTVKESAVEVPTNSEVRRRVSFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPEEWNNFLERLECKKDSDIWEKEENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEQEIFDGYKAIAVPSEEEKKSHRSLYANIEAMADLKFTYVATCQNYGNQKRCGDRRATDILNLMVNNPSLRVAYIDEVEEREAGKIQKVYYSVLIKAVDNLDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMLVAITVYAFLYGRFYLSLSGLEEAIIKIARKKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTALSDIIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHERFADNYRMYSRSHFVKGIEIAILLICYGLYGSATSDSTSYALLSLSMWFLACSWLFSPFLFNPSGFEWQKIVEDWEDWAKWISSRGGIGVPSNKSWESWWDEEQEHLQHTGIWGRIWEVILALRFFVYQYGIVYHLHVARGDKSISVYGLSWLVVVAVIVILKIVSMGSKTFSADFQLMFRLLKLFLFIGTVVILTLMFALLSFTVGDIFASLLAFMPTGWAFIQIAQACRPLVKGIGMWGSIKALSRGYEYVMGVLIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK* 1912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1629 1911 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 6 1910 - -
Gso5g1629 1911 SMART FKS1_dom1_2 318 434 IPR026899 -
Gso5g1629 1911 Pfam Vta1 like 38 165 IPR039431 -
Gso5g1629 1911 Coils Coil 1309 1329 - -
Gso5g1629 1911 Pfam 1,3-beta-glucan synthase component 1124 1727 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Gso5g1629 1911 Pfam 1,3-beta-glucan synthase component 1033 1118 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Gso5g1629 1911 Gene3D - 24 179 IPR023175 -
Gso5g1629 1911 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 6 1910 - -
Gso5g1629 1911 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 320 431 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1629 Gso-Chr5 39615177 39630171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1629 4 1911 Glycosyltransferase AT1G05570 60.614 0.0 2412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1629 K11000 - gmx:100777985 3800.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1629 5 39615177 39630171 Gso4g1788 4 48090905 48105779 PCT