Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1788 ATGTCGTTTCTGGAGGCCGCACCGCACACGCTGACGCGGCGCCCGTCGAGGAGCGCAGCCACGACCTTCTCGACGGAGGTTTTCGACAACGACGTCGTTCCGTCGTCACTTGCCTCCATCTCGCCGATTCTCCGAGTGGCCAATGAGATCGAAAGCGAACGCCCTAGGGTTGCCTATCTATGTCGGTTCTACGCTTTCGAGAAGGCGCACCGGTTGGATCAGAGCTCCAGCGGACGTGGCGTGAGGCAGTTTAAGACGCTGTTGCTGCAGCGATTGGAGAGGGACAATGGACCCAGTCTTGCTGGACGTTTAAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAGCTCTTGACCAAGGAGAGCAGGCAGACAGAGCACAGCTCGGGAAAGCTTACCAGACCGCCGGGGTGCTTTTTGAAGTGCTTTGTGCCGTTAACAAGACTGAGAAGGTCGAAGAAGTAGCTCCCGAGATCATTGCGGCTGCTAGAGATGTCCAGGAAAAGACGGAGATATATGCGCCTTTCAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGTCTATTATGCAGCTTGAAGAGATTAAGGCGTCTGTTTCTGCTCTCTGGAATACTCGTGGCCTGAATTGGCCAACTTCATTTGAGCAACAAAGGCAGAGAACTGGAGAATTGGATCTGCTTGATTGGCTTAGAGCCATGTTTGGGTTTCAGAGGGACAACGTCAGGAACCAGAGAGAGCATTTGATTCTGCTTCTTGCTAACTCTCACATAAGGCTAAACCCCAAACCCGAGCCTCTTAACAAGCTTGATGATCGGGCTGTTGATGCAGTGATGAATAGTCTGTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAGCATAGTTTACGACTCCCTCCAGGTCAGCAAGAGATACAACAAAGGAAGTTACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCATAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAGCCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTATAACTCCCATATACAGAGTAATTGAAACGGAAGCCAAGAAGAGCAGACATGGAGCAGCTCCTCACTCAGCCTGGTGCAACTATGATGATCTAAATGAATATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCTATGCGTGATGATGGTGAATTTTTTAGATCAACATTTAATTTGACACAGGGAAGAAAGGGTTCTCAGAAAACATCTGGAAGAACTGTCAAATCAAATTTTGTTGAGACCCGGTCATTCTGGAACATCTTCCGCAGTTTTGATCGTCTTTGGACCTTCTATATACTGGGTTTGCAGGTGTTGCTCATTGTTGCCTGGAAAGGAATTTCAGTGTTGGATATTTTTCAGAAAGATGTCTTATATGATCTCTCTAGCATATTCATTACAGCAGCCATTCTACGCTTACTTCAAAGTATATTGGACCTGGCTCTGAACTTTCCTGGCTATCATGGTTGGAGATTTACTGATGTGCTACGAAATTTTCTCAAAGTCATTGTCAGTCTTTTTTGGGTTGTTGCTCTTCCACTCTTCTATGTGCATTCCTTCAAAGGCGCCCCTGACTTTATCAAGGATATGCTTTCCTTTACTGATAAAATAAAGGGGATTCCACCATTGTATATGTTAGCAGTTGCAGTTTATCTGCTTCCAAATTTACTAGCAGCTATTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCGGACTGGCACATTATTAGACTTCTCCTATGGTGGTCACAGCCAAGAATCTATGTCGGAAGAGGAATGCATGAGAATCAATTTGCTCTCCTAAAATACACTCTTTTTTGGGTGATTCTCTTGGCTGCTAAATTTTCATTCAGCTTTTTTGTGCAGATCAAACCTCTAGTTCAGCCAACTAAAGACATAATGAGCATTAGGCATGTTGATTTTGGTTGGCATGAGTTTTTCCCCAAAGCTCGACATAACTATGGTGCAGTTGTTGCACTTTGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATCTGGTATTCCATCTTCTCAACTATTTGTGGTGGTGTTATTGGAGCCTTCGATCGTCTTGGAGAGATACGCACTCTGACCATGTTAAGATCACGGTTCCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAAGCGGGAAAAGAGATTCACTTTCTCGAAGCGATTTGCCGAGATTTCTGCAAGCAGAAGGAGTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAGTTATTTGCAGTTTCCGTGAGGAAGATATCATAAGTGATAGGAAAGGCTTCTGAGCCAAACTCTTTAGTTGCTTTTTCTCCTAAATCCTAGCTTCTATTCTTTCTCCTTCATCTTTTGATTACTGAACTATGTTGCATTACTCCAGGGAGATGGATCTTTTGATGGTTCCATACTCATCAGATCCTAGCTTGAAAATAATTCAGTGGCCACCGTTTCTGCTTGCAAGCAAGATTCCCATAGCACTGGATATGGCAGCTCAATTTCGAGGAAAGGACTCTGATCTTTGGAGGCGCATATGTGCAGATGAATATATGAAGTGTGCTGTGATTGAATGCTATGAATCTTTTAAAAATGTCCTGAATGCTTTGGTAGTAGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCATTAAGGAAGTTGAAAACAGCATCTCTAAGAATACACTTGTTGCAAATTTTCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATTCATCCAAGCAAGGTACAGTGGTGGTCTTGTTGCAAGACATGTTAGAAGTGTTTACGCGTGATATGGTGGTAAATGAGATAAGTGAGTTGGCAGAACTTAATCATAGTAGTAAGGACACTGGAAGGCAACTTTTTGCTGGTACAGATGCAAAACCCGCAGTATTATTCCCTCCTCTGGTTACAGCACAATGGGAGGAACAGATTAGACGTCTTCATTTACTTTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCATTGTTCATGGACATGCCACGTGCTCCACGAGTTCGTAAAATGCTGTCATTCAGTGTTCTAACTCCATACTACAGTGAAGAGACTGTCTATTCCAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGACTAACTTCATGGAACGGCTTGAATGTAAGAAAGATAGTGAGATATGGGAGAAAGATGAACACATATTGCAGCTACGACACTGGGCCTCATTACGAGGACAAACTCTTAGCAGGACAGTAAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTTCAGGCTTTTCTTGATATGGCAAATGAACAGGAGATACTTGATGGCTATAAAGCTGTTACTGTTCCATCTGAGGAAGATAAAAAGAGCCATAGATCCTTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAGTTTACATACGTCGCCACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGACCGTCGTGCAACAGACATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTGGCTTATATTGATGAAATTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCTGTACTGGTCAAAGCTGTGGACAATCTTGACCAAGAAATATTTCGAATAAAATTGCCTGGTCCAGCAAAGATAGGAGAAGGGAAGCCTGAAAATCAAAATCATGCCATCATTTTTACTAGAGGCGAAGCTCTTCAGACTATTGACATGAATCAGGATAATTACTTGGAAGAAGCTTTTAAAATGCGCAATCTTTTGGAAGAATTTAATGAAGATCATGGGGTGCGACGACCTACAATATTAGGTGTTCGTGAGCACATCTTTACTGGCAGTGTCTCTTCCCTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTGAAGGTGCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTTCACATAACTCGAGGAGGAATCAGCAAGGCATCTTGTGGCATCAATCTGAGCGAGGATATTTTTGCTGGATTCAACTCAACACTAAGACGCGGAAATATTACTCATCATGAATATATCCAATGCGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGTAACGGAGAGCAGACATTAAGCAGAGATATCTACAGGCTGGGACATCGTTTTGACTTTTTCCGCATGCTATCATGTTATTTCACGACCATTGGATTTTATATAAGCTCAGTGATTGTGGTCCTCACATGTTATGCATTCCTATATGGCAAACTGTACCTGTCTTTGAGTGGATTTGAGGCTGCAATAGTAAAGTTGGCTAGGAGAAAGGGAGATGATGCACTAAAGGCAGCATTAACTTCTCAATCCCTTGTTCAACTAGGACTTATAATGACTTTGCCCATGTTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTATCGGTGAGCTCATAATAATGCAGTTGCAGCTAGCACCTGTTTTCTTTACTTTCTCCCTAGGGACAAAGCTGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTTGTTCGCCATGAGAAGTTTGCTGAAAATTACAGGATGTACTCTAGGAGTCACTTTGTAAAAGGGATTGAGCTCACAATTTTGCTCTTATGTTATAAGATTTATGGATCAGCAACACCTGATTCAACGTCATATGGCTTTCTCTCATGGTCAATGTGGTTTATGGTCTGCTCTTTTCTGTTTTCTCCTTTCCTTTTCAATCCATCAGGGTTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGCAAAAGTGGATAAGTATTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGAATGAGGAACAGGAGCATCTGCAGCACACTGGATTTCTGGGGCGGATATGTGAGATTATACTTGACCTGCGTTTCTTTGTCTATCAGTATGGTATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCTTGGTTTATGCTCTGTCCTGGATAGTGATAGTAGCTGTCATGGTTATCCTTAAGATTGTATCCATGGGTAGAAAGCAATTCAGTGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTCATTGGAGCCATTGTTGCTCTAGGCTTAATGTTTACTCTGCTGAGTCTCACAGTTGGAGACATCTTTGCGAGCCTCCTAGCCTTTTTGCCAACAGCTTGGGCAGTTATTCAGATAGGACAAGCATGCAGGCCATTCGTGAAGGGCATTGGAATGTGGGGTTCTGTCAAAGCTTTAGCAAGGGGCTACGAATACTTGATGGGAGTGGTTATTTTTGCACCAGTAGCCATATTAGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGACTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAGTAG 5850 0.4291 MSFLEAAPHTLTRRPSRSAATTFSTEVFDNDVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNGPSLAGRLKKTDAREIQAYYQQYYEHYVRALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQSIMQLEEIKASVSALWNTRGLNWPTSFEQQRQRTGELDLLDWLRAMFGFQRDNVRNQREHLILLLANSHIRLNPKPEPLNKLDDRAVDAVMNSLFKNYKTWCKFLGRKHSLRLPPGQQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIETEAKKSRHGAAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFRSTFNLTQGRKGSQKTSGRTVKSNFVETRSFWNIFRSFDRLWTFYILGLQVLLIVAWKGISVLDIFQKDVLYDLSSIFITAAILRLLQSILDLALNFPGYHGWRFTDVLRNFLKVIVSLFWVVALPLFYVHSFKGAPDFIKDMLSFTDKIKGIPPLYMLAVAVYLLPNLLAAILFLFPMLRRWIENSDWHIIRLLLWWSQPRIYVGRGMHENQFALLKYTLFWVILLAAKFSFSFFVQIKPLVQPTKDIMSIRHVDFGWHEFFPKARHNYGAVVALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNTYLVPTDKKREKRFTFSKRFAEISASRRSEAAKFAQLWNEVICSFREEDIISDRKGF*AKLFSCFFS*ILASILSPSSFDY*TMLHYSREMDLLMVPYSSDPSLKIIQWPPFLLASKIPIALDMAAQFRGKDSDLWRRICADEYMKCAVIECYESFKNVLNALVVGEAEKRTISVIIKEVENSISKNTLVANFRMGFLPSLCKKFVELVEILKDADSSKQGTVVVLLQDMLEVFTRDMVVNEISELAELNHSSKDTGRQLFAGTDAKPAVLFPPLVTAQWEEQIRRLHLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWTNFMERLECKKDSEIWEKDEHILQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEQEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEIEEREGGKVQKVYYSVLVKAVDNLDQEIFRIKLPGPAKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAFKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAGFNSTLRRGNITHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYISSVIVVLTCYAFLYGKLYLSLSGFEAAIVKLARRKGDDALKAALTSQSLVQLGLIMTLPMFMEIGLERGFRTAIGELIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGIELTILLLCYKIYGSATPDSTSYGFLSWSMWFMVCSFLFSPFLFNPSGFEWQKIVEDWDDWQKWISIRGGIGVPSNKSWESWWNEEQEHLQHTGFLGRICEIILDLRFFVYQYGIVYHLNVARGDKSILVYALSWIVIVAVMVILKIVSMGRKQFSADFQLMFRLLKLFLFIGAIVALGLMFTLLSLTVGDIFASLLAFLPTAWAVIQIGQACRPFVKGIGMWGSVKALARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKNK* 1950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1788 1946 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 951 964 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gso4g1788 1946 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 321 432 IPR026899 -
Gso4g1788 1946 Gene3D - 25 187 IPR023175 -
Gso4g1788 1946 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 3 1945 - -
Gso4g1788 1946 SMART FKS1_dom1_2 319 435 IPR026899 -
Gso4g1788 1946 Pfam Vta1 like 39 167 IPR039431 -
Gso4g1788 1946 Pfam 1,3-beta-glucan synthase component 1068 1762 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Gso4g1788 1946 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 3 1945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1788 Gso-Chr4 48090905 48105779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1788 5 1946 Glycosyltransferase AT1G05570 59.686 0.0 2399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1788 K11000 - gmx:100777245 3862
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1629 5 39615177 39630171 Gso4g1788 4 48090905 48105779 PCT