Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1256 ATGAAGTTGAAGCAGCAGAAAATGAGAGTAGTAGTAGGGTCAGTGTGGCTGTGCCTCTTTCTGTTGGCTGTCGGGGAGTCGGAGGGAGCGGATTTGGCGGCGAAGTGCAACCTGCTGGTTCAGAAAGTGCTGCCGTGCCTGAACTTCGCGACGGGGCAGGCGGCGGTTCCGACCAAGGACTGCTGCGAGGCGACGTCGGAGATAAAGAAGAGCGACCCGGAGTGCCTGTGCTTTGCGATTCAACAGACTCACAAGGGTAGTCCGGAGGTGAAAAATATGGGCATACAAGAGGCTAGGCTGCTTCAGCTACCTTCTGCTTGTAACTTGAAGAATGCCAGCACCACCAACTGTCCTAAGCTTCTGGGTCTATCTCCAAACTCCGCTGACGCTGCTATCTTCAGAAATGGTTCGTTGAAAACCAATTCAGCTTCAACAGTTTCAGAAGACATCCACAAGGGCTCTTATGGAAACATGCTTAGACCTGTTCTCGTTGCAGACCTAATAGCTGTTCTCCTCGTCATGATTCCAATAGGTTCGTGA 540 0.5167 MKLKQQKMRVVVGSVWLCLFLLAVGESEGADLAAKCNLLVQKVLPCLNFATGQAAVPTKDCCEATSEIKKSDPECLCFAIQQTHKGSPEVKNMGIQEARLLQLPSACNLKNASTTNCPKLLGLSPNSADAAIFRNGSLKTNSASTVSEDIHKGSYGNMLRPVLVADLIAVLLVMIPIGS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1256 179 Gene3D - 33 115 IPR036312 -
Gso5g1256 179 CDD AAI_LTSS 43 109 - -
Gso5g1256 179 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 10 150 - -
Gso5g1256 179 SMART aai_6 36 117 IPR016140 -
Gso5g1256 179 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 150 IPR043325 -
Gso5g1256 179 Pfam Probable lipid transfer 27 117 IPR016140 -
Gso5g1256 179 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 117 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1256 Gso-Chr5 36123167 36125786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1256 35 140 Acyl Lipid Metabolism Gene Families AT1G27950 55.660 6.29e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1256 - - gmx:100799403 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0050 18 448174 450351 Gso5g1256 5 36123167 36125786 PCT
Gso13g1571 13 31026541 31029722 Gso5g1256 5 36123167 36125786 PCT
Gso5g1256 5 36123167 36125786 Gso18g0050 18 448174 450351 PCT
Gso5g1256 5 36123167 36125786 Gso13g1571 13 31026541 31029722 PCT