Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1237 ATGACCAATCTGCAAATACAAACAGAGGAACCCCCTCTGAGTCAAACACCGCTTCTAATTTCAATTCAGCAGCAACTAGAGAACGAGAATGAGGGAAATCATCATCATAATAATAACTATAATGAGAATAAGAAGGACCAAGACGTTCAAGTTGACGGAGAGATTGTGGAGGAGAGCCTGGTGCGGTTGGAGCGCTTTCTTACGCTGTTAGGGTTCAACCAGGACTCGCCGTTGAGCTTGGTGGTTTCGTGGAGCGTGTTCGCGGCGGTGGGAGTTGTGACGCCGCTGGTCGCGCTTTCCATGTGCGAGTGTCCGGAGTGCGACAGGTACGAGATTCAAAGCTTCGAGATGGCGATCGTGGCGTTTCAGGCGAGCCTAGCCGCCGTCTCCTTGCTCTGCCTCTCCCACAACCTTCGCAAGTACGGTCTCCGCCGGTTCCTCTTCGTTGACCGCTACTCCGGGAAGTTGCATTGCTTTCACCGCGACTACGTCGCTCAGATTTCGGGATCTATGCGCATGCTTTTTCTGTGGGTGTTGCCGTGTTTCATTCTGAAGACAGTGCGAGAAATCATTCGCATTTTCTATGTACAACATGGGTCCTGGTGGCTCTCGCTTGCTATTTTATCAGCTTTGATTATATCTTGGACTTATATGAGTACAATCTCTCTGTCAGCCTGCATTTTGTTTCACTTGGTCTGTAGTTTGCAAGTGATCCATTTTGATGATTATGGGAAGCTCTTGCAAAGGGAAAGTGATGTTTTAGTTTTTATGGAGGAGCACATTCGGTTGCGCTATCATCTCTCCAAGATAAGTCATAGGTTCAGAATCTATCTTCTTCTAGAGTTCTTGGTCGTCACAGCAAGCCAGGTTGTGACTCTTTTGCAGGTCACTGGATATGGTCAAATGCTTACCTTCATTAATGGTGGAGATTTTGCTGTATCCACACTAGTTCAGGTGGTGGGCATCATTATTTGTCTGCATGCTGCGACAAGAATTTCTCATAGAGCTCAAAACATTGTTTCCCTTGCGAGCAGGTGGCATGCAATGCTAACATGCACATCTTCTGATGCACCCTCTCAATTGAGAAGCTCTGCTAGTGCAGGGAGCTTGGAGGCTGCAAACCATTTAAATGCAATACAAGTAGACTATTCTGAAAGTGATCTAGAGTCAATGGATTATGCTGGAATGTTTACAAATACCCAATGGACTTCCAATGTGTCTTCACATCACAAGAGACAAGCTTTTGTGATGTATTTGCAGACGAATCCAGGAGGAATCACTATATTTGGATGGACAGTTGACCGGTCTCTGGTCAACACCATATTTTTCCTTGAATTAAGTCTGGTTACCTTTGTTCTCGGTCAGACCCTAATCTAA 1377 0.4597 MTNLQIQTEEPPLSQTPLLISIQQQLENENEGNHHHNNNYNENKKDQDVQVDGEIVEESLVRLERFLTLLGFNQDSPLSLVVSWSVFAAVGVVTPLVALSMCECPECDRYEIQSFEMAIVAFQASLAAVSLLCLSHNLRKYGLRRFLFVDRYSGKLHCFHRDYVAQISGSMRMLFLWVLPCFILKTVREIIRIFYVQHGSWWLSLAILSALIISWTYMSTISLSACILFHLVCSLQVIHFDDYGKLLQRESDVLVFMEEHIRLRYHLSKISHRFRIYLLLEFLVVTASQVVTLLQVTGYGQMLTFINGGDFAVSTLVQVVGIIICLHAATRISHRAQNIVSLASRWHAMLTCTSSDAPSQLRSSASAGSLEAANHLNAIQVDYSESDLESMDYAGMFTNTQWTSNVSSHHKRQAFVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLGQTLI* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1237 458 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 6 458 - -
Gso5g1237 458 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 6 458 IPR021924 -
Gso5g1237 458 Pfam Protein of unknown function (DUF3537) 59 444 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1237 Gso-Chr5 35893299 35897781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1237 - - gmx:100793058 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1237 5 35893299 35897781 Gso8g0855 8 7933934 7937585 GST
Gso18g0074 18 631104 633754 Gso5g1237 5 35893299 35897781 PCT
Gso13g1547 13 30860954 30864099 Gso5g1237 5 35893299 35897781 PCT
Gso5g1237 5 35893299 35897781 Gso18g0074 18 631104 633754 PCT
Gso5g1237 5 35893299 35897781 Gso13g1547 13 30860954 30864099 PCT