Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1547 ATGTCCATACAAACAGAGCAACCTCTTCCTACTCACACTCCCTTCCTAAATTCAAACTCAAACCAAAGCCACCAACACCAACCACAAGAAAACAACAACGATTATGAAACACAAACACCTCTTGATGATGTCCTTGCAAGTTTAGAAGTGCTTCTCACGCTACTTAGCTTCAACCAGTCTTCATTGTTGAGCTTCACTGTGTCTTGGACAACGTTTGCGGTGGTTGGTGTGGTTGCGCCACTCCTGGCTCTTCAGGTGTATGACACCGACAAAAATCAGATAAAAGGTTCCTCTTGGTTGACCATCACGCTGCTCACATGCCATGCTTTCACCATGATTTCGGGATCTATACGGTTAATCATTCTGTGGGTTTTGTCATGTTTCCTTTTGAAGACAGCCCGAGAAATCACTCACCTTGCCTTCGTAGAACACGGGTCCCTTTGGCCCTCCATTGCTGTTTTGTTGGCTCTGATAGTATCATGGACTTATGTGAGTGCAATCTCTTTATCAGCCTGTGTTCTATTTCACTTGGTCTGCAGTTTGCAACTCGTTCACTTTGATGATTATAGGAAACTCTTGCAAAGGGAATATGATGCCTTGGTTTTTATGGAGGAGCACATTCGGTTGCGATTCCAACTGTCCAAGATAAGCCATAGGTTCAGAATTTACCTTCTTCTACAGTTCTTGGTGGTCACAGCTAGCCAATTTGTGACTCTATTACCGGTCTCTGGATTTGGTGGAGCACTGACTTTCATAAGTGGTGGAGATTTTGCTGTTTTCACACTTGTTAAGGTGGTTGGGATTATTATTGTTCTGCATGCAGCAACAAAGATTTCACTTAGAGCACAGGGCATTGTTTCCCTTGCAAGCAGGTGGCATGCGCTTGTAACATGCACTTCTGATCCATCTAAACTGAGATATTGTGCTAGTACAGGGAGCTTGGAAGCTGCAAAACATTTAAACTCAATATTTTTGGATTACTCAGAAAGTGATCTAGACTCATCAGATTACATTGTTGTGCCTTCAAATACCCAGTTAGCTTCTTATATGTCCTCACATCACAAGAGACAAGCCTTTGTGATGTATCTGCAGACAAATGCTGGAGGAATCAGTATATTTGGATGGACAGTTGATCGGTCTCTAGTCAACACCAATCAAGGGCCTTTGGGCCTTCCAGGTTACTACGATAAATTGAGCTGTTGCTTCCTGCATTTCCATTATTGTTTCTTACACTTTCCATTACATCATAGAAAATCCATTCCGAAATGGACTTTCCATAATGCAATGGGAACTGTAGGAATACAGGAAGTTTTACCCAATAAATTGATTGAAAGGGCCCACAAATTCTACAGTTCTTCTTCGTTACCAAGTTACTACCAAATTGGGTACAAGCCATGGCAGTTTCTTAAGACACGAGTCATGAACAATAAGTATATGAAGATCCATCATGCAAGAGAACAGCCTCTAGTCTTACACTAG 1479 0.4206 MSIQTEQPLPTHTPFLNSNSNQSHQHQPQENNNDYETQTPLDDVLASLEVLLTLLSFNQSSLLSFTVSWTTFAVVGVVAPLLALQVYDTDKNQIKGSSWLTITLLTCHAFTMISGSIRLIILWVLSCFLLKTAREITHLAFVEHGSLWPSIAVLLALIVSWTYVSAISLSACVLFHLVCSLQLVHFDDYRKLLQREYDALVFMEEHIRLRFQLSKISHRFRIYLLLQFLVVTASQFVTLLPVSGFGGALTFISGGDFAVFTLVKVVGIIIVLHAATKISLRAQGIVSLASRWHALVTCTSDPSKLRYCASTGSLEAAKHLNSIFLDYSESDLDSSDYIVVPSNTQLASYMSSHHKRQAFVMYLQTNAGGISIFGWTVDRSLVNTNQGPLGLPGYYDKLSCCFLHFHYCFLHFPLHHRKSIPKWTFHNAMGTVGIQEVLPNKLIERAHKFYSSSSLPSYYQIGYKPWQFLKTRVMNNKYMKIHHAREQPLVLH* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1547 492 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 111 415 - -
Gso13g1547 492 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 4 100 - -
Gso13g1547 492 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 111 415 IPR021924 -
Gso13g1547 492 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 4 100 IPR021924 -
Gso13g1547 492 MobiDBLite consensus disorder prediction 1 36 - -
Gso13g1547 492 Pfam Protein of unknown function (DUF3537) 44 93 IPR021924 -
Gso13g1547 492 Pfam Protein of unknown function (DUF3537) 113 384 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1547 Gso-Chr13 30860954 30864099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1547 - - gmx:100793191 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0074 18 631104 633754 Gso13g1547 13 30860954 30864099 GST
Gso13g1547 13 30860954 30864099 Gso5g1237 5 35893299 35897781 PCT
Gso13g1547 13 30860954 30864099 Gso8g0855 8 7933934 7937585 PCT
Gso5g1237 5 35893299 35897781 Gso13g1547 13 30860954 30864099 PCT
Gso8g0855 8 7933934 7937585 Gso13g1547 13 30860954 30864099 PCT