Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0670 ATGGCTGCCTCATCCACCATCAACAACTTCCTCTCTTTCTTCTTACGCACAAAACCACCACCACCACCCTCTCCACCGCAGTTCAACCCCACCACTTCTCAGAACCAGAAACCCTCCTCCTCACAGCCCCTAATTGCCCAATACAACCCTCCTCCTTCACCCTCTTGCGCTTCTTCTTCTGAGTTGTCCTCTGTTATATGCCCATCCATGGCGTACTCCAACACGCTCTTCTTCCGGTCGCCGTACAACGTGCAGGTGGTGGTGGCCGAGGACGAGTCCGAGGAGAAGCTCCTGGGCAGGTTCCGCAGAGAGGTGATCAAGGCCGGCATCGTTCAGGAGTGTAGGAGGAGACGGTATTTCGAGAACAAACATGAAGAGAAAAAACGCAAGTCGCGCGAGGCTGCCAGATGTAACCGCAAAAGGCGGCCCATGTCAAAAACTGTAGGACAGAAGAAGCAGGATGTCTCAGCAACCAAAAGAGAAGACGATGAGGATAACTGGGATCTACCTGAAGGAGACACTCTGTATTAA 531 0.5273 MAASSTINNFLSFFLRTKPPPPPSPPQFNPTTSQNQKPSSSQPLIAQYNPPPSPSCASSSELSSVICPSMAYSNTLFFRSPYNVQVVVAEDESEEKLLGRFRREVIKAGIVQECRRRRYFENKHEEKKRKSREAARCNRKRRPMSKTVGQKKQDVSATKREDDEDNWDLPEGDTLY* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0670 176 TIGRFAM S21p: ribosomal protein bS21 84 141 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 Gene3D Ribosomal protein S8 98 136 IPR038380 -
Gso5g0670 176 Pfam Ribosomal protein S21 85 136 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 Hamap 30S ribosomal protein S21 [rpsU]. 83 139 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 MobiDBLite consensus disorder prediction 13 55 - -
Gso5g0670 176 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 24 176 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 MobiDBLite consensus disorder prediction 30 44 - -
Gso5g0670 176 PRINTS Ribosomal protein S21 family signature 87 95 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 PRINTS Ribosomal protein S21 family signature 95 104 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 PRINTS Ribosomal protein S21 family signature 107 117 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 PRINTS Ribosomal protein S21 family signature 119 129 IPR001911 GO:0003735|GO:0005840|GO:0006412
Gso5g0670 176 MobiDBLite consensus disorder prediction 123 176 - -
Gso5g0670 176 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 24 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0670 Gso-Chr5 10028370 10032275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0670 - - gmx:100777605 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0784 19 31999616 32000864 Gso5g0670 5 10028370 10032275 PCT
Gso5g0670 5 10028370 10032275 Gso19g0784 19 31999616 32000864 PCT