Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0667 ATGGGGCACAAGAACACAATTTTCTTGGCACTTATAGCTACCTTGATTGCAAAGGAAGCCTTTGCAGCACAACATGTAGTTGGTGGAAGCCAAGGCTGGGATCAATCCACAGACTTTAAGTCATGGACTTCAGGCCAAACATTCAAGGTTGGAGATAAACTTGTTTTCAAGTACAGTTCTTTTCATAGTGTGGTTGAGCTAGGCAACGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCGGTGCAGTCCTTGAGCACTGGCAACGATGTTGTGAAACTGGACAAGCCAGGTACAAGGTACTTCACTTGTGGTACCTTGGGCCACTGTAGTCAAGGAATGAAGGTGAAGATTACCATACGAAAAGGGAATGCTCCTTCCCCCGCATTGTCACCGGCAACATCTCCGTCACTGTCACCATCACTGTCACCATTATTGTCATCAACATCATTATCATCACCACCATCATCTTCTTCTCCTACAAATACTAATGCATCTTCGGCCTCACAATGCTTCACCTCTTTTATGTTCATTGTTGCATTATCGGTCACCATAATGGTGTCATTGTTTTAA 573 0.4398 MGHKNTIFLALIATLIAKEAFAAQHVVGGSQGWDQSTDFKSWTSGQTFKVGDKLVFKYSSFHSVVELGNESAYKNCDISSPVQSLSTGNDVVKLDKPGTRYFTCGTLGHCSQGMKVKITIRKGNAPSPALSPATSPSLSPSLSPLLSSTSLSSPPSSSSPTNTNASSASQCFTSFMFIVALSVTIMVSLF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0667 190 MobiDBLite consensus disorder prediction 127 163 - -
Gso5g0667 190 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
Gso5g0667 190 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Gso5g0667 190 PANTHER BNAA06G32330D PROTEIN 7 140 - -
Gso5g0667 190 MobiDBLite consensus disorder prediction 128 163 - -
Gso5g0667 190 PANTHER BLUE COPPER PROTEIN 7 140 IPR039391 GO:0009055
Gso5g0667 190 CDD Phytocyanin 23 120 - -
Gso5g0667 190 Gene3D - 21 125 IPR008972 -
Gso5g0667 190 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0667 Gso-Chr5 9939544 9940713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0667 7 120 Miscellaneous Gene Families AT3G27200 64.035 5.36e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0667 - - gmx:100306337 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0667 5 9939544 9940713 Gso19g0780 19 31817227 31818260 PCT