Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0780 ATGGGGCGCAAGAACACAATTTTCTTGGCATTGGTTGTTACTTTGATCACTAAGGAGACAATGGCAGAACAACATGTAGTTGGTGGAAGCCAAGGTTGGGATGAATCAACAGACTTCAATTCTTGGGTTTCAGGCCAAACATTTAAGGTTGGCGATCAACTTGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAACTAGGTAGTGAGAGTGAGTACAAGAATTGTGATCTTGGCAATGCAGTGAACTCAATGAGCAGTGGCAATGATGTTGTGAAACTGAACAAGCCTGGCACACGTTACTTTGCATGTGGTACAATGGGCCATTGCGATCAAGGCATGAAGGTGAAGATCACAACAGTGTCTGGCTCTGAGACCTCTTCCCCTGCATCATCATCTTCTTCTTCATCTAATTCATCTTCGGCCTCACAATGTCTCGTTTATCTTGTGCTCATTGTTGGATTGTTGATTGCCTCTCTTCTTAACTAG 489 0.4315 MGRKNTIFLALVVTLITKETMAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKYSSLHSVVELGSESEYKNCDLGNAVNSMSSGNDVVKLNKPGTRYFACGTMGHCDQGMKVKITTVSGSETSSPASSSSSSSNSSSASQCLVYLVLIVGLLIASLLN* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0780 162 MobiDBLite consensus disorder prediction 121 140 - -
Gso19g0780 162 Gene3D - 21 127 IPR008972 -
Gso19g0780 162 CDD Phytocyanin 24 119 - -
Gso19g0780 162 PANTHER BNAA06G32330D PROTEIN 7 134 - -
Gso19g0780 162 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Gso19g0780 162 SUPERFAMILY Cupredoxins 21 120 IPR008972 -
Gso19g0780 162 PANTHER BLUE COPPER PROTEIN 7 134 IPR039391 GO:0009055
Gso19g0780 162 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0780 Gso-Chr19 31817227 31818260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0780 15 121 Miscellaneous Gene Families AT3G27200 71.028 1.36e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0780 - - gmx:100305865 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0667 5 9939544 9940713 Gso19g0780 19 31817227 31818260 PCT