Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0354 ATGCAAGACTCAATTGGGATTCCTGCTTGCTTTTCTTCTTCAGCAGAGAAGCAGCATAGCCATGATGATCATGGAGCTGTGACCCGTTCGGGTCAGAGCGTGTACATGTCAGTGTATAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATCACATGGTGCAAAAACCTCTTGCTTCATGGGCTTTCGGTGTCAGTGGAAGGTCCAGAAGGAGAAGAACAGTACACCTGCAAGGTCGAGCTGAAGCCATGGTACTTTTGGAGAAAACAAGGTTCCAAGCGCTTCATAGTAGATGGCAAAGCCGTTGACATTTTCTGGGACCTTAAAGCTGCAAAATTTAACGGCGAGACAGAACCAACCTCGGAGTATTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTGCTGCTTCTCGGTGATCTAAAGAAAGAGGCATACAGAAGGACGGGGTGCAGACCAGCACTCATTGACCCCATTTTGGTTTCAAAGAAAGAACACATTTTTGGGAAGAAGAAGTTCTCCACTAGAGCCAAGTTTCACGAGAAGGGTAGGTGGCATGAGATTTCAATTGAGTGCAAGAACAAGGGGAATTATAATGTGGATTCTCTAGGTGGGGTTCATCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTTAGAGGCAACGAGTCAATTCATCTCAGCAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTTTTTAGTCCTGGTTTAAAGCATGCTTTGTTCATTTTTAAGCCAATTTTGTCATCTAGTACTACTACTACCACCACTACTTCTATGTCATATTCGTCACCTTCATTATCATCCTCATCACCTCCACTATCTAATGATCAGACAAGGAATTCTGGATCAGTGGAGGGATTTAGTGTTAGTGGGTCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAAGTTGAATGA 981 0.4373 MQDSIGIPACFSSSAEKQHSHDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGNYNVDSLGGVHPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSSSTTTTTTTSMSYSSPSLSSSSPPLSNDQTRNSGSVEGFSVSGSSEFCLFLYAWKVE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0354 326 PANTHER OS01G0909400 PROTEIN 1 326 - -
Gso5g0354 326 MobiDBLite consensus disorder prediction 279 309 - -
Gso5g0354 326 PANTHER EXPRESSED PROTEIN 1 326 IPR008586 -
Gso5g0354 326 Pfam Plant protein of unknown function (DUF868) 30 324 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0354 Gso-Chr5 3707022 3708840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0354 7 326 EF-hand Containing Proteins AT5G28150 37.072 1.22e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0354 - - gmx:100779755 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0354 5 3707022 3708840 Gso17g1051 17 9963793 9965798 GST
Gso5g0354 5 3707022 3708840 Gso4g1591 4 45556769 45558635 PCT
Gso5g0354 5 3707022 3708840 Gso6g1492 6 15014962 15016813 PCT
Gso4g1591 4 45556769 45558635 Gso5g0354 5 3707022 3708840 PCT
Gso6g1492 6 15014962 15016813 Gso5g0354 5 3707022 3708840 PCT