Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1051 ATGATGCAAGACTCAATTGGGATCCCTGCTTGCTTTTCTTCTTCAGCAGAGAAGCAGCATAGCCACCACGATCATGATCATGGAGCTGTGACCCGTTCTGGTCAGAGCGTGTACATGTCTGTGTATAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATTACATGGTGCAAAAACCTCTTGCTTCATGGGCTTTCGGTGTCAGTGGAAGGCCCAGAAGGAGAAGAACAGTACTACACCTGCAAGGTCGAGCTGAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGCTTCATAGTAGATGGCAAAGCCGTTGACATTTTCTGGGACCTTAAAGCTGCAAAATTTAACGGAGAAACAGAACCAACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTTCTTCTTCTCGGTGATCTAAAGAAAGAGGCATACCGAAGGACGGGGTGTAGGCCAGCACTCATTGACCCCATTTTGGTTTCAAAGAAAGAACACATTTTTGGCAAGAAGAAGTTCTCCACTAGAGCCAAGTTTCACGAGAAGGGTAGGTGGCATGAGATTTCGATTGAGTGCAAGAACAAGGGAAATAATAATTATAATGTGGATTCTTTAAATGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTTAGAGGCAACGAATCAATTCATCTCAGCAAAATGAGAGTAGAGATGCAGATTGAGATTGGGTTTGGATTGAGAAAGCAAGTGGGGCCAAACAGTGGCTTTGGGAGTTAG 813 0.4514 MMQDSIGIPACFSSSAEKQHSHHDHDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGNNNYNVDSLNGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEMQIEIGFGLRKQVGPNSGFGS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1051 270 PANTHER EXPRESSED PROTEIN 2 251 IPR008586 -
Gso17g1051 270 Pfam Plant protein of unknown function (DUF868) 33 251 IPR008586 -
Gso17g1051 270 PANTHER OS01G0909400 PROTEIN 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1051 Gso-Chr17 9963793 9965798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1051 8 254 EF-hand Containing Proteins AT5G28150 35.223 2.05e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1051 - - gsj:114392642 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0354 5 3707022 3708840 Gso17g1051 17 9963793 9965798 GST
Gso17g1051 17 9963793 9965798 Gso4g1591 4 45556769 45558635 PCT
Gso17g1051 17 9963793 9965798 Gso6g1492 6 15014962 15016813 PCT
Gso4g1591 4 45556769 45558635 Gso17g1051 17 9963793 9965798 PCT
Gso6g1492 6 15014962 15016813 Gso17g1051 17 9963793 9965798 PCT