Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2053 ATGGCGGAGGAGAAGAGGGCGCCGTCGTCGTTCGTGAAGAAAGGCGACCGGCAAATGTTCACGGTGGAGCTCTGGCCAGGTGAGACCACCATAGTTTCGTGGAAGAAGCTGTTGAAGGACGCTAACAAGCACAACGGATCCACTTCGGCGCCACAACACGTCGCAATCGCTCCGGGTCAACCTGTGGAGGTTGAAGAAACAGATCCTTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAGCGCCTTTACACGGGTAAGGACAGTAGTGATGATGAGGATCTGCTTGATGTTCCTGATGATGATCAGTATGATACTGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCTGTACTACCTAATCAGCAACCAAAGAAAAGGCGCAGAAAAGATATATTGAAGAATGCTGGTGAAAACAATGATGGTCATGGATCAAATAAAAATGTAAAAGTTGGCAGGCCAGCATCTGCCAAAACAGCTTCACTACAGGCAAAGAATATGTTAAATTTATCTGAGAATTTGGTTGCACCTGGTGACCATATTGAAGACTTGAAACTTCCAAATCAATCGGATGTCTCTGGAATTATTTCGAAAAAGAAAACTGCTGATACTAAACCAATATTGAACCCTTCTGTCTCTTTGAAAACATCAAGTGATGATGCTCCTGCTGTAACAGATGCAAAAGATGTTGACAAGCAGAAGATAGGAGCTTTTCAATCTAAGAACATTAGTGATAAATATATAGATGGAAGTGGATCGTTTGATGCATCTCATCATAAATACAATGAAAAAAGTGCATATGCTCATTCCAAATCCCAACCTGGAAGACCCTCAAGTAATATTGATGATATCAATTGGACAAAAGAAAAAAATGGTATGCGTGAACTGCCAGATCTTAACTTGTCTGAGGGAAAGTCTGCTACCCAAGCAACAAAGTCTGAAAACATGCACAAGAAAGAGGGTTCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTCTTCGTGAGTTGGAAAAAATGGTTGCAGAATCTAGGCCACCAGCAGTGGATAACCAAGAGGCTGATGCTACATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTAAAGCTTGCTAAAGTTGCTAGACTAGCGGCAACGCACGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAGCTAAGAACATTAAAGAGAAACTTAAAAATAATGATCAATATGGGTCTGTCAGCAAAGCAGGAGGAGGATAATAGGTTTCAACAGATAAAGAAGGAAGTTGTTGATTTGATTAAGATGCAGGCCCCAACTCTGGAATCCAAGCAGCAGCTGAAAGGTGAAGCATCTGGTGATTTTCAAGAATTTGGTACTGATGGAAAACCAATAACTAAAAGGAAGTTTACTATGGATGCTGCATTGGAGGACAAGATTTGTGATCTCTACGATCTTTTTGTAGATGGGTTGGATGAAAATGCCGGTCCACAGATTAGAAAGTTGTATGCTGAGCTTGCACAGTTATGGCCCAGTGGTTACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCGAAAGAGAGGCGCAGAGCACTATACAACAAACATAAGGATCAGGAGAAAATTAAGAGGAAAAAGTTGCTGGCACCTAAGCAACAGGAGAACGTTCGATTTGATACTAATACAATTACTTCACAGCAGAACCTACGAGAGAGATCAGCTCCAGAGTCTAGCAGTCATGCTTATACTTCAGGGAACAAGCAAGTTTCTAATACAAGCACCCCAAGTCCAATGAATGGTCTAAAACAAGAAAAAGCAAAGGGAAGTTCAAGCAGTTCCGTGGATGATGTCAGGGTTGCAGATGGTGTTTTGACAAAGAAGGTAAAGAGAAAACCAGAACTTGAGTTGGAAGGAGCACATTTAGGTCCTGAGAAAGTAGCTTCCTTGCAGGGAGAAGAAAGACCCAGGTCCCTAAAGCAGTCTACAGGGCCACTTCCCACCAAATCAAATCTTCAGCCAACATCTCTGCCTGATCTTGAACAGTCAAGCTAA 2172 0.4194 MAEEKRAPSSFVKKGDRQMFTVELWPGETTIVSWKKLLKDANKHNGSTSAPQHVAIAPGQPVEVEETDPSQPNRFSAVIEKIERLYTGKDSSDDEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPNQQPKKRRRKDILKNAGENNDGHGSNKNVKVGRPASAKTASLQAKNMLNLSENLVAPGDHIEDLKLPNQSDVSGIISKKKTADTKPILNPSVSLKTSSDDAPAVTDAKDVDKQKIGAFQSKNISDKYIDGSGSFDASHHKYNEKSAYAHSKSQPGRPSSNIDDINWTKEKNGMRELPDLNLSEGKSATQATKSENMHKKEGSSVRPKTSMLEKALRELEKMVAESRPPAVDNQEADATSQAVKRRLPREIKLKLAKVARLAATHGKVSKELINRLMSILGHLIQLRTLKRNLKIMINMGLSAKQEEDNRFQQIKKEVVDLIKMQAPTLESKQQLKGEASGDFQEFGTDGKPITKRKFTMDAALEDKICDLYDLFVDGLDENAGPQIRKLYAELAQLWPSGYMDNHGIKRGICRAKERRRALYNKHKDQEKIKRKKLLAPKQQENVRFDTNTITSQQNLRERSAPESSSHAYTSGNKQVSNTSTPSPMNGLKQEKAKGSSSSSVDDVRVADGVLTKKVKRKPELELEGAHLGPEKVASLQGEERPRSLKQSTGPLPTKSNLQPTSLPDLEQSS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2053 723 MobiDBLite consensus disorder prediction 296 358 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 298 317 - -
Gso4g2053 723 Pfam HPC2 and ubinuclein domain 100 142 IPR014840 -
Gso4g2053 723 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 723 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 660 680 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 573 723 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 694 723 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 343 358 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 594 656 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 166 191 - -
Gso4g2053 723 MobiDBLite consensus disorder prediction 573 592 - -
Gso4g2053 723 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2053 Gso-Chr4 50970444 50979583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2053 - - gmx:100778848 1399.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2053 4 50970444 50979583 Gso4g2053 4 50970444 50979583 ECH
Gso4g2053 4 50970444 50979583 Gso6g0996 6 9613870 9622732 GST
Gso14g1222 14 28936689 28950349 Gso4g2053 4 50970444 50979583 PCT
Gso13g0170 13 10336253 10349607 Gso4g2053 4 50970444 50979583 PCT
Gso4g2053 4 50970444 50979583 Gso14g1222 14 28936689 28950349 PCT
Gso4g2053 4 50970444 50979583 Gso13g0170 13 10336253 10349607 PCT