Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0170 ATGGCGGGGGAGGCGGCTCCTCTCGGCGGGGGCGACGATTCCTCGTCGGCGGCGGCGAGGGCTCCGTCGTCGTTCGTGAAGAAAGGCGACAGGCAAATGTTCACGGTGGAGCTCCGCCCGGGAGAGACCACCATAGTGTCGTGGAAGAAGCTCATGAAGGACGCCAACAAGGTCAACAATGGATCCGCTTCCGCACCGGAGCACCGCGCTCCCAATGCGAACCCTGCGCTCGAGTCCAGAATCGCTCCGGGACAACCTATGGAGATTGAAGAACAGGGTGCACCTCAGACAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGACAGCAGTGATGAGGAGGATGCACTTGATGTTCCTGATGATCAATATGATACAGACGACTCTTTCATTGATGATGCTGAATTGGATGAGTATTTTGAGGTTGATAATTCTTCAATCAAACATGATGGATTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCAGTATTACCTATCCAGCAAGCAAAGAAAAGGCGCCGAAAAGATGTACCGAAGAATCCTGGAGAACATATTGATAGTCATGTATCAAATAAACATGTAAAAGTGGGCAAGACTGCTGCTGGAAAGACTGCATCGTTACCTGTGAAAAATACGATTAGTTCCTCCCATAATTTGGGTGTACCTGGTGAACATTATGAAGACATGACATTTCAGAATCAATTGGATGTGTCTGGAATTAGTTTGAAAAGGAAAACTGCTGACACAAGACCAATGTTGGATCCTCCTGTTTGTTCGAAAGTATCAACTAATGCTCCTGCTGCTGCAGAAGATGCTGAAAAACAGAAGACTAGAGTACTTCAATCTAAGAACACAAGTGATAAATATAAAGATGCAAGTGGCTTGCTTGATACTTCTCGTCAGAAGTACCATGAAAAAAGTGCATCTGCAAAATCCAAATCCCAGCCTGGAAAAATCTCAATTAGTGTTGACAATCTAGAAAAGGCTGGTCGGTCAAAAGATAAAAATGACATCCATGAACTGCCAGATCTTAACTTGTATGTCGGAAAATCTGCTATACAAGCACCAAAATCTGAAAATGTGCTCAAGAAAGATGGTTCTAGTGCTAGGCCTAAAACTACAACACTTGAGAAAGCTATTCGAGAGTTGGAGAAGATAGTTGCAGAATCAAGGCCGCCAACTATGGAAAACCAGGAGGTTGATACCACACCTCAGGGTGTCAAACGGAGATTGCCTAGAGAAATAAAGCTGAAACTTGCTAAAGTTGCCAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCAAAGGAGTTACTTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAGCTCAGAACGCTAAAGAGAAACTTAAAAATTATGATCAGTATGGGTTTGTCTGCGAAGCAGGAGAAAGATGTTAGGTTTCAACTGATAAAGAAGGAAGTTATTGAGATGATTAAGATGCAGGCCCCAACCATAGAATCCAAGCTACAGCAGCAAGCTGCAGCATCTGGGGAACAAGAATTAGGTCCTGATGGGAAACCAATAACTAAAAAGAATTTTAGTATGGACACTGCATTGGAAGACAAGATTTGTGATCTCTATGACCTCTTTGTTGATGGGTTAGATGAAAATTCGGGTCCGCAAATCAGAAAGTTGTATGCTGAGCTTGCAGAGTTATGGCCAAATGGTTACATGGACAACCATGGGATCAAGCGTGCAATTTGCAGGTCAAAAGAGAGGCGCAGAGCACTGTACAGCAGACATAAGGATCAGGAGAAAATCAAGAGGAAAAAGTTGTTGGCACCTCGACCAGAGGAGAATGTTCAAGTTGATCCTAGTCCAATTACTTTGCAACAGCCCTTGCGAGAAAGATTAGCTACAGACTCTAGTGGTCATCCTCATGCTTCAGTAAACAAGACAGTTTCTAATACAGTCACCACCGCACGGGTTCACAATCCTGTCAATGGTCCAAAACAAGAAAAAGCAAAGGGAAGTTCAGGTGGTTCTCTGGATGATGTCAAGGGTGCTGATGGTGTTTTAATAAAGAAGAAGGTAAAGAGAAAGCTAGAACAGGGTTTGGAAGGAACTCACTTTCGCCCTGAGAAGATAGGAGCTTCTCTGCAAGGAGAAGAAAAAACAAGATCCCTAAAGCAGTCTGCAGGTGTTCCCCCGAAATCAAACCTTCAGCCAACTTCTCTACCTGGTCTTGAGCAGTCAAGCTAA 2259 0.4409 MAGEAAPLGGGDDSSSAAARAPSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDANKVNNGSASAPEHRAPNANPALESRIAPGQPMEIEEQGAPQTNRFSAVIEKIERLYMGKDSSDEEDALDVPDDQYDTDDSFIDDAELDEYFEVDNSSIKHDGFFVNRGKLERINEPPVLPIQQAKKRRRKDVPKNPGEHIDSHVSNKHVKVGKTAAGKTASLPVKNTISSSHNLGVPGEHYEDMTFQNQLDVSGISLKRKTADTRPMLDPPVCSKVSTNAPAAAEDAEKQKTRVLQSKNTSDKYKDASGLLDTSRQKYHEKSASAKSKSQPGKISISVDNLEKAGRSKDKNDIHELPDLNLYVGKSAIQAPKSENVLKKDGSSARPKTTTLEKAIRELEKIVAESRPPTMENQEVDTTPQGVKRRLPREIKLKLAKVARLAQASQGKVSKELLNRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEKDVRFQLIKKEVIEMIKMQAPTIESKLQQQAAASGEQELGPDGKPITKKNFSMDTALEDKICDLYDLFVDGLDENSGPQIRKLYAELAELWPNGYMDNHGIKRAICRSKERRRALYSRHKDQEKIKRKKLLAPRPEENVQVDPSPITLQQPLRERLATDSSGHPHASVNKTVSNTVTTARVHNPVNGPKQEKAKGSSGGSLDDVKGADGVLIKKKVKRKLEQGLEGTHFRPEKIGASLQGEEKTRSLKQSAGVPPKSNLQPTSLPGLEQSS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0170 752 Pfam HPC2 and ubinuclein domain 127 166 IPR014840 -
Gso13g0170 752 MobiDBLite consensus disorder prediction 1 30 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 171 206 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 120 134 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 508 528 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 688 709 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 637 752 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 57 79 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 637 665 - -
Gso13g0170 752 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 19 752 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 281 295 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 303 321 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 723 752 - -
Gso13g0170 752 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 19 752 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 177 203 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 113 134 - -
Gso13g0170 752 MobiDBLite consensus disorder prediction 256 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0170 Gso-Chr13 10336253 10349607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0170 - - gmx:100795185 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1222 14 28936689 28950349 Gso13g0170 13 10336253 10349607 GST
Gso13g0170 13 10336253 10349607 Gso4g2053 4 50970444 50979583 PCT
Gso13g0170 13 10336253 10349607 Gso6g0996 6 9613870 9622732 PCT
Gso4g2053 4 50970444 50979583 Gso13g0170 13 10336253 10349607 PCT
Gso6g0996 6 9613870 9622732 Gso13g0170 13 10336253 10349607 PCT