Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1775 ATGTCTCCTCCCCTAATGGAATCAAGTGCTTCCACTCTAGTAATTTACCCTGCATCACAGCCACAACAAGAGCCCAAAAATGAGAATAATGGTGGCATAGTTTTTGGTTCAAATTTGCAGCAAATGCAAGGGGAAATGCCCAAAGAGTTCCTATGGCCTTCTAGGGACTTGGTTGACACCACCCAAGAGGAGCTGAAGGAACCCCTTGTGGACTTAGCAATCTTTAAGAATGGTGATGAGAAAGCCATTGCTAATGCAGCAGAGCTTGTGAGAACTGCCTGCTTGAAGCATGGGTTCTTCCAAGTGATAAACCATGGTGTGGACCCAGATCTCATTGATGCTGCATATCATGAAATTGATTCCATTTTTAAGCTCCCATTGAGCAAAAAGATGGGTGCTAAGAGAAAACCTGGTGGTGTCTCAGGGTACTCTGGTGCTCATGCAGATCGTTATTCGTCCAAGTTGCCATGGAAAGAGACGTTTTCTTTCCTCTATGATCACCAAAGCTTCTCCAACTCCCAGATTGTTGACAATTTCAAGTCTGTATTAGGCGAGGATCTTCAACACACAGGGAGGGTTTATCAAAAGTACTGTGAAGCAATGAAGGATTTATCTTTAGTAATTATGGAGCTCTTGGCTATTAGTTTGGGTGTGGATCGTGGACATTATCGAAGATTTTTTGAAGATGGTGACTCAATAATGAGGTGCAACTATTATCCACCATGCAACAGTGCCAACCTCACCTTAGGCACTGGCCCTCACACTGATCCAACCTCACTAACCATTCTTCATCAAGACCAAGTTGGAGGTTTAGAAGTTTTTGTAGATAACAAATGGTTCGCTGTTCGCCCTCGATCTGAAGCCCTAGTCATAAACATAGGTGACACTTTCATGGCTTTGTCAAATGGGAGATACAAGAGTTGTCTACACAGGGCATTGGTGAACACATACAGGGAGAGAAGGTCCCTGGTTTACTTTGTGTGTCCAAGAGAAGACAAAATAGTGAGGCCCCCAGACAATCTGTTATGCAGAAATGAGGAAAGGAAGTACCCTGATTTCACATGGTCCAATTTGTTTGAATTTACACAGAAGCACTATAGGGCTGATGTTGCTACCCTCCAAAGCTTCATTGAGTGGCAGCAATGCTCTAATTCCAAGTCCAAGCCATCCAACTTCTAG 1179 0.4368 MSPPLMESSASTLVIYPASQPQQEPKNENNGGIVFGSNLQQMQGEMPKEFLWPSRDLVDTTQEELKEPLVDLAIFKNGDEKAIANAAELVRTACLKHGFFQVINHGVDPDLIDAAYHEIDSIFKLPLSKKMGAKRKPGGVSGYSGAHADRYSSKLPWKETFSFLYDHQSFSNSQIVDNFKSVLGEDLQHTGRVYQKYCEAMKDLSLVIMELLAISLGVDRGHYRRFFEDGDSIMRCNYYPPCNSANLTLGTGPHTDPTSLTILHQDQVGGLEVFVDNKWFAVRPRSEALVINIGDTFMALSNGRYKSCLHRALVNTYRERRSLVYFVCPREDKIVRPPDNLLCRNEERKYPDFTWSNLFEFTQKHYRADVATLQSFIEWQQCSNSKSKPSNF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1775 392 Pfam non-haem dioxygenase in morphine synthesis N-terminal 68 168 IPR026992 -
Gso4g1775 392 Pfam 2OG-Fe(II) oxygenase superfamily 231 329 IPR044861 -
Gso4g1775 392 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 383 - -
Gso4g1775 392 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 24 383 - -
Gso4g1775 392 PRINTS Isopenicillin N synthase signature 90 107 - -
Gso4g1775 392 PRINTS Isopenicillin N synthase signature 254 275 - -
Gso4g1775 392 PRINTS Isopenicillin N synthase signature 289 315 - -
Gso4g1775 392 SUPERFAMILY Clavaminate synthase-like 43 368 - -
Gso4g1775 392 Gene3D - 38 367 IPR027443 -
Gso4g1775 392 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 229 329 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1775 Gso-Chr4 47906195 47910902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1775 45 367 Glycosyltransferase AT5G59530 29.032 1.78e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1775 K05282 - gmx:100777070 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1775 4 47906195 47910902 Gso4g1775 4 47906195 47910902 ECH
Gso4g1775 4 47906195 47910902 Gso6g1302 6 12714859 12719945 GST