Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1754 ATGAAGTCAGGGAAGTTGGGAATTTTGGTTCTGCTCGTCTTGTTCAGCTCTTCTACTTGTTCCGCTTGGTTTGGTAGTAAACACAAAAGTTCAAGTGGAAGGAGCTCCTTTCGTCCAGATGAAGCATCGTCATCGTCATCGTCGTCGTCGTCGTCGTCGTCACCATACATACTAAACCGTTTTCGTGCTGGCTCATCGGTCGTGTTCCCGGTTCACGGCAATGTTTACCCAGTTGGGTTTTATAATGTTACTCTCAACATCGGCCAACCACCCAGGCCATATTTTCTAGATATTGACACGGGTAGCGATCTCACCTGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCACATCCACTATACAGACCCAGCAATGACTTAGTGCCCTGCAGGCATGCCCTCTGTGCATCCTTGCACCTCAGTGATAACTACGACTGTGAAGTCCCACATCAATGTGACTACGAAGTTCAGTATGCAGATCATTACTCATCCCTTGGTGTACTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTCCAACTCAAAGTTCGTATGGCACTTGGGTGTGGATATGATCAGATTTTTCCAGATCCTTCTCACCACCCATTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACCAGCTTGACATCACAGCTGAATAGTCAGGGTTTGGTAAGAAATGTGATTGGGCACTGTTTGAGTGCACAAGGAGGAGGGTATATCTTCTTTGGAGATGTGTATGATTCTTTTAGACTAACTTGGACTCCAATGTCATCCAGAGATTACAAACATTACTCAGTCGCAGGGGCAGCTGAACTCCTTTTTGGAGGGAAGAAAAGTGGGGTTGGAAATCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACCTATTTTAACTCTTATGCTTACCAAGTACTAATTTCTTGGTTGAAGAAGGAATCAGGTGGAAAGCCCCTAAAAGAAGCACATGATGATCAAACTCTCCCTCTTTGTTGGCGTGGTAGAAGACCTTTCAGAAGCATATACGAAGTGAGAAAATACTTCAAGCCAATTGTGCTTAGTTTCACCAGCAACGGGAGAAGTAAAGCTCAATTTGAAATGCTTCCTGAAGCATATCTGATAGTATCAAACATGGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGGGATCTGAACCTAATCGGAGACATATCCATGCTAAACAAAGTGATGGTATTTGACAACGACAAGCAGTTGATTGGTTGGGCACCAGCAGATTGTGACCAGGTTCCAAAATCCAGAGATGTCAGCATTTGA 1329 0.4477 MKSGKLGILVLLVLFSSSTCSAWFGSKHKSSSGRSSFRPDEASSSSSSSSSSSSPYILNRFRAGSSVVFPVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHALCASLHLSDNYDCEVPHQCDYEVQYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVIGHCLSAQGGGYIFFGDVYDSFRLTWTPMSSRDYKHYSVAGAAELLFGGKKSGVGNLHAVFDTGSSYTYFNSYAYQVLISWLKKESGGKPLKEAHDDQTLPLCWRGRRPFRSIYEVRKYFKPIVLSFTSNGRSKAQFEMLPEAYLIVSNMGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWAPADCDQVPKSRDVSI* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1754 442 ProSiteProfiles Peptidase family A1 domain profile. 81 427 IPR033121 -
Gso4g1754 442 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 436 - -
Gso4g1754 442 Pfam Xylanase inhibitor N-terminal 81 251 IPR032861 -
Gso4g1754 442 MobiDBLite consensus disorder prediction 25 55 - -
Gso4g1754 442 Gene3D Acid Proteases 252 435 IPR021109 -
Gso4g1754 442 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Gso4g1754 442 PRINTS Pepsin (A1) aspartic protease family signature 293 304 IPR001461 GO:0004190|GO:0006508
Gso4g1754 442 PRINTS Pepsin (A1) aspartic protease family signature 403 418 IPR001461 GO:0004190|GO:0006508
Gso4g1754 442 SUPERFAMILY Acid proteases 73 434 IPR021109 -
Gso4g1754 442 Pfam Xylanase inhibitor C-terminal 290 427 IPR032799 -
Gso4g1754 442 PANTHER ASPARTYL PROTEASES 2 436 IPR001461 GO:0004190|GO:0006508
Gso4g1754 442 Gene3D Acid Proteases 59 251 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1754 Gso-Chr4 47657863 47661951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1754 65 437 Miscellaneous Gene Families AT1G44130 52.381 1.14e-143 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1754 - - gmx:100812524 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1754 4 47657863 47661951 Gso4g1754 4 47657863 47661951 ECH
Gso4g1754 4 47657863 47661951 Gso6g0970 6 9333593 9336749 GST
Gso14g1204 14 28199878 28203451 Gso4g1754 4 47657863 47661951 PCT
Gso13g0148 13 9994519 9998405 Gso4g1754 4 47657863 47661951 PCT