Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1698 ATGGAGCCAAACGAGGAGAACGGAGGCAGTACGAGCAGGGAGGAACAGGAAGAGGCATTGGTGGCTTTGATCGAACACCGAACCCACGAAGTCAAAAACCTCCGTCACCGCATCGCTTATTATAAAACCCAGCTTGATGAAGCGGAGAAAAGGTTGCAAGATTCTGAATCCAAATTGGCTCGCCTTCGAGGTCAAACAGTGTCATCTAGAAGTACCTTAGATGATGGAATCGAAACTTTGAAGACAAAGAGCAGATCAAGCAGTCCCATTGATAGAAACGAAGTTTCTACCAAAAGCCAACATCAATCTAAACCAGAACTTCTTATTCCTTCACTGAATCCAAAAATATCACAACCTGTATTGTTGCCAAAGTCTTCTTCAAAAGCTTCAATAACTTCCAGTTCTGAAGCCACTCCTGGAGTCCATAATTCTCCTATCACGGGTGGTAGCTCTAGGGGAAAATCTGACAAGTCTCAGAGTAATAGACTTTCTTCTGAGCAGCAAAAAACTGAAGTCAAGGAGAAAGGGACAAAAAGGAAATTTGAACAAAAAGGACACAAGGAATTGATTCCTTTAGTACGCAAGAGTTCTTCACCAAGCTTGGTAACCTGTCAAACAAGCAACCACATCTCAAGTCAACACAAGAGGAAATTGCGGAGTATTGCTTTGTGTCCTGTGAATGATCAGCTTTTTGTGACTAGTGCTCTGGATGGAGTGGTCAACTTTTGGCAAGTTCAGGCTAAGGGAGCAGGAGCCTCTCGTCTTAGCACTACCGATTGTGCATCCCAAAAGCAGAGGAGATGGCCAGAAGATTTAGCTTGGCATCCAGAGGGAAACAGCCTATTTTCAGTATACAGTGCTGATGGTGGAGACTCTCAAGTATCGATTACAAATTTGAATAAAGGACAAGGGGGAGAACGTGTAAAATTCTTAGAGGACAAGCCGCATGTTAAGGGAATTATCAATGGCATTGTTTTTATGCCCTGGGAAAATACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTATTCTTTGGAATGAGCAGGATGATGAGAAGTGGAAGCCAAAGGCATTGCACAGGAATCTTCACTCATCTGCTGTAATGGGAGTTGCTGGTATGCAGCAGAAGCAGATGGTGTTGTCGGTTGGTGCAGACAGGAGAATATTTGGGTATGATGTACGTGTAGGAAGAGCAGATTTCAAGCATCAGGTTGATAGTAAATGCATGAGTGTCCTGCCCAATCCATCCGACTTCAATTTATTCATGGTTCAAACAGGGACGCACGAGAGGCAGCTTCGGTTGTTTGATATCAGATTGAGGAATACAGAACTTCATGCTTTTGGATGGAAGCAAGAAAGCAGTGATTCTCAATCAGCTCTGATAAATCAGGCTTGGTCTCCTGATGGACATTATATAACATCTGGGTCTGCAGATCCTGTGATTCACATATTTGATATAAGGTATACTGCTCACAAGCCTTCCCAATCTATAAGAGCGCATCAGAAACGAGTCTTCAGAGCCATGTGGCTTCAGTCTATTCCTCTTGTCATTTCCATATCATCTGATCTCAACATTGGACTGCACAAGGTTTACTCTTGA 1602 0.4326 MEPNEENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQTVSSRSTLDDGIETLKTKSRSSSPIDRNEVSTKSQHQSKPELLIPSLNPKISQPVLLPKSSSKASITSSSEATPGVHNSPITGGSSRGKSDKSQSNRLSSEQQKTEVKEKGTKRKFEQKGHKELIPLVRKSSSPSLVTCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNFWQVQAKGAGASRLSTTDCASQKQRRWPEDLAWHPEGNSLFSVYSADGGDSQVSITNLNKGQGGERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVILWNEQDDEKWKPKALHRNLHSSAVMGVAGMQQKQMVLSVGADRRIFGYDVRVGRADFKHQVDSKCMSVLPNPSDFNLFMVQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQAWSPDGHYITSGSADPVIHIFDIRYTAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVYS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1698 533 Gene3D - 405 533 IPR015943 GO:0005515
Gso4g1698 533 Gene3D - 62 404 IPR015943 GO:0005515
Gso4g1698 533 Pfam WD domain, G-beta repeat 463 486 IPR001680 GO:0005515
Gso4g1698 533 Coils Coil 31 65 - -
Gso4g1698 533 MobiDBLite consensus disorder prediction 167 185 - -
Gso4g1698 533 MobiDBLite consensus disorder prediction 59 75 - -
Gso4g1698 533 MobiDBLite consensus disorder prediction 57 185 - -
Gso4g1698 533 SUPERFAMILY WD40 repeat-like 210 530 IPR036322 GO:0005515
Gso4g1698 533 SMART WD40_4 304 347 IPR001680 GO:0005515
Gso4g1698 533 SMART WD40_4 203 244 IPR001680 GO:0005515
Gso4g1698 533 SMART WD40_4 449 486 IPR001680 GO:0005515
Gso4g1698 533 SMART WD40_4 491 530 IPR001680 GO:0005515
Gso4g1698 533 SMART WD40_4 353 393 IPR001680 GO:0005515
Gso4g1698 533 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 5 531 - -
Gso4g1698 533 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 5 531 - -
Gso4g1698 533 MobiDBLite consensus disorder prediction 89 107 - -
Gso4g1698 533 MobiDBLite consensus disorder prediction 118 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1698 Gso-Chr4 47022028 47028886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1698 - - gmx:102662882 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1698 4 47022028 47028886 Gso6g1388 6 13629639 13637679 GST