Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1581 ATGTTGAGACTTTACGTGTGTGTATTGGAAGCCAAGGACCTTCCCGTGAAGGATACTTACGTGAAGCTTAGGCTGGGAAAGTTCAAGTGCAGGACAAGGATATTGAGGAACACAAGCAACCCCGTTTGGAACAAGGAGTTTGGTTTCAATGTGCATGGTGCTGAAGACATGCTTGTTGTCTCTGTTGTTAATCATGATAATATTAATGAGTGCAGAGTGACCAATGGTTCTGTGGAGTTTGTGGGTGAGGTACGGATTCCGGTAGGTTCGGTTGCTTTTGAGGATAAGCAAACGTTTTTGCCCACGTGGTTCTCTCTTGAAAGCCCCAAGAGTGGGAAGTTTTTCAATGAATATTGTGGGAAAATTCTCCTTACCGTTTCTCTTCATGGTAAAGGTCGTTCTTCTTTTATCAATCATAAGCATTCTTCAAATTCAACTATTGCGGTTGACAACTCAAGAGACTTGGAAGGTCTGCACGTTGCGTGTCAGGTACCTTGTGATAAAATGGGTGCAGGCAAACAATTGTTGAAGGCTATTGCTAATGGTCTGCATAGGATTTTCAAAAAGAAAGAAGAAAACTCAAAATCTGGTGATTCTTCAGAACTATCTACTTCATTATCTGATTATGAAGATAGTGTACAGGAAAATTCATCTCCTTGTAGCTTTGAAGAAGCCATTGCACTAATGGAATCAGGAGATGACAAACCAGAAATGCCTGAAAATTTGCCTGGCGGTGTTCTAGTAGATCAGATTTATTTAGTCTCTCCGAATGACCTTAATGTGTTTCTTTTTGCACCCAATTCACAGTTTAGTAAAGATATGGTTGAACTGCAGGGAACAACAAATGTGCAAGAGGGACCTTGGACATGGAAAAATGGAGACATGTCGTGTTTAACACGAGTTGTTACCTATACAAAAGCGGCTACGAAATTGATTAAGGCAGTTAATGCAATTGAGGAGCAAACCTACATTAGAGTGAGCAGAAAGGAATTTGCTATACTTGTTAGTGTAAGCACACCAGAGGTCCCATATGGAAATTCATTTAGGATTGAATTGCTTTACAAGATAATGCCAGGGGAGGCATCTTCAGGAGAGGAATCCTCCCATCTAGTTGTGTCTTGGGGAATTGTCTTCCTCCAAAGCACAATGATGAAAGGCATGATAGAAGGTGGGGCAAGACAGGGATTGAAGGAGAGTTTGGTCCAGTTCTCGGACCAACTTGCGCTGAATTTTAAGGTGCTAGATAAAGCAGATTTACCAGACAAGGAACATTTGTTGGCAACTTTGCAAACTGAAGACCAGTGGAATTGGTGGCAGACAATTACATACTTTTGGAATTTCACTGTGGCTTCCACCATTTTCATGTTTTTGTATGTGTTGGTGCATATTTTAAGGTGTGGTCCAAGTCTACCTCAGGGCTTGGAATTTAGTGGGCTTGAATTGCCAGATAGTTTTGGGGAGCTCATTACAAGTGGAATTTTAATCATCCAGTTGCAGCGTGTTTATAATATGGTGTCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTCAAAGCCAATGGTGATGGATGGGTTCTTACTGTGGCTTTAATTGAGGGGGTTGACCTGGCCTCCTTGGAGTCCGAAGGATTGTCAGATCCCTATGTAGTTTTCACCTGTAATGGACAAACAAGGTCAAGCTCTGTCAAGCTTCAAATGCCCGATCCTCTATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTACATGTGGAAGTTTTTGATTTTGATGGTCCATTCGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTTCTAAAACACACATCAACTGAGTTGGCAGATATGTGGGTCATGCTTGAAGGAAAGCTTGCCCAATCTTCTCAGTCAAAGTTGCACTTGAGAATTTTCTTGGATAACAATAATGGAGTTGAAACAATCAAGGAATATTTGGAGAAGATGGAAAAGGAAGTAGGCAAAAAATTGAATCTTAGATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGCTTTGCCTCCGGAAGAATTTCTCATCAAAGATTTCACTTGTTACCTCAAGAGAAAAATGCCTTTACAGGGTCGGTTGTTTCTTTCAGCAAGGATTCTGGGGTTTCATGCCAATTTGTTTGGACATAAAACCAAGTTTTTCTTCCTTTGGGAAGATATTGAAGAGATACAAGTGCTTCCTCCATCATTGGCAACATTAGGAAGCCCTACATTGGTCATAATTCTGCGAAGAGGTCGGGGTCTTGATGCAAGGCATGGTGCAAAGACTCAAGATGAAGAAGGGAGACTTAGATTTCATTTTCAATCATTTGTTTCATTTAGTGCTGCCTCCAGAACAATAAAGGCCTTGTGGAGGACAAGAATACTGAACCCCTATCAGAAAGAACAAATTTCAGAAGAGCATGAAGATCAAGAAAGCTTTGTAATTCTGGAAGACTCTGCATCTATCTTAGAGGATGAAGAAAAAATGTCCAGAATTTTCTCTGCAGAACTTCCAATTAAGATGAAATCAGTGATGGGAATATTTGATGGAGGAAACCTGGAGCATAAAATTATGCAGAGAACAGGATGTATGAACTATGAAACAACATCATGGGAACAAGTAAAGCCTGATTTCTTCGAGAGGCATGTTTCTTACCAATTCAATCGACATGTGTCAGTTTTTGGTGGTGAAGTCACATGCACACAACAAAAATTTCCAAATACAAACACTGGAGGTTGGACTGTGATTGAAGTTATGGCTCTTCACAGTGTCCCATTTGCTGATCACTTCCATATTCATTTTAGGTATGAAATTGAGAAATCCTCTCTTGGTGACTGTGCATGCAAGTGTGATGCTTACATTGGTATTATGTGGCTCAAGAGCTCTAAGTTTCAGCAGAGGATCAACAGGAACATAACAGCCAAGTTTAACCTCCGATTGAAGGAAATATTTGAACTGGTTCAGAAAGAGATTTTGTTAATGTCTCAGAACTCTCACGGATAA 3045 0.4043 MLRLYVCVLEAKDLPVKDTYVKLRLGKFKCRTRILRNTSNPVWNKEFGFNVHGAEDMLVVSVVNHDNINECRVTNGSVEFVGEVRIPVGSVAFEDKQTFLPTWFSLESPKSGKFFNEYCGKILLTVSLHGKGRSSFINHKHSSNSTIAVDNSRDLEGLHVACQVPCDKMGAGKQLLKAIANGLHRIFKKKEENSKSGDSSELSTSLSDYEDSVQENSSPCSFEEAIALMESGDDKPEMPENLPGGVLVDQIYLVSPNDLNVFLFAPNSQFSKDMVELQGTTNVQEGPWTWKNGDMSCLTRVVTYTKAATKLIKAVNAIEEQTYIRVSRKEFAILVSVSTPEVPYGNSFRIELLYKIMPGEASSGEESSHLVVSWGIVFLQSTMMKGMIEGGARQGLKESLVQFSDQLALNFKVLDKADLPDKEHLLATLQTEDQWNWWQTITYFWNFTVASTIFMFLYVLVHILRCGPSLPQGLEFSGLELPDSFGELITSGILIIQLQRVYNMVSHFVQARFQMGTDHGLKANGDGWVLTVALIEGVDLASLESEGLSDPYVVFTCNGQTRSSSVKLQMPDPLWNEILEFDAMEEPPSVLHVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVMLEGKLAQSSQSKLHLRIFLDNNNGVETIKEYLEKMEKEVGKKLNLRSPQRNSTFQKLFALPPEEFLIKDFTCYLKRKMPLQGRLFLSARILGFHANLFGHKTKFFFLWEDIEEIQVLPPSLATLGSPTLVIILRRGRGLDARHGAKTQDEEGRLRFHFQSFVSFSAASRTIKALWRTRILNPYQKEQISEEHEDQESFVILEDSASILEDEEKMSRIFSAELPIKMKSVMGIFDGGNLEHKIMQRTGCMNYETTSWEQVKPDFFERHVSYQFNRHVSVFGGEVTCTQQKFPNTNTGGWTVIEVMALHSVPFADHFHIHFRYEIEKSSLGDCACKCDAYIGIMWLKSSKFQQRINRNITAKFNLRLKEIFELVQKEILLMSQNSHG* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1581 1014 MobiDBLite consensus disorder prediction 198 217 - -
Gso4g1581 1014 Pfam VAD1 Analog of StAR-related lipid transfer domain 247 395 IPR031968 -
Gso4g1581 1014 Pfam VAD1 Analog of StAR-related lipid transfer domain 846 986 IPR031968 -
Gso4g1581 1014 ProSiteProfiles VASt domain profile. 243 415 IPR031968 -
Gso4g1581 1014 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 2 1011 - -
Gso4g1581 1014 SMART gram2001c 681 747 IPR004182 -
Gso4g1581 1014 Gene3D - 679 806 IPR011993 -
Gso4g1581 1014 ProSiteProfiles C2 domain profile. 509 628 IPR000008 -
Gso4g1581 1014 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 131 IPR035892 -
Gso4g1581 1014 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Gso4g1581 1014 MobiDBLite consensus disorder prediction 191 217 - -
Gso4g1581 1014 PANTHER BNAA05G37250D PROTEIN 2 1011 IPR044511 -
Gso4g1581 1014 Gene3D C2 domain 2 152 IPR035892 -
Gso4g1581 1014 SMART C2_3c 3 100 IPR000008 -
Gso4g1581 1014 SMART C2_3c 529 628 IPR000008 -
Gso4g1581 1014 Pfam GRAM domain 683 763 IPR004182 -
Gso4g1581 1014 Pfam C2 domain 529 628 IPR000008 -
Gso4g1581 1014 Pfam C2 domain 3 106 IPR000008 -
Gso4g1581 1014 ProSiteProfiles VASt domain profile. 842 1005 IPR031968 -
Gso4g1581 1014 CDD C2 4 106 - -
Gso4g1581 1014 CDD C2 530 630 - -
Gso4g1581 1014 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 528 653 IPR035892 -
Gso4g1581 1014 Gene3D C2 domain 512 648 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1581 Gso-Chr4 45417455 45422486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1581 1 151 Lipid Metabolism Gene Families AT1G22610 31.250 2.71e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1581 - - gmx:100811103 2031.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1581 4 45417455 45422486 Gso6g1500 6 15120344 15125445 GST