Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1274 ATGTTCTGTTCTGTCACCATCATTCTCGAACCTTCACAAAAACCAGCAAAAGAAATGGCTCCAAATTGCTTGCACCAAGTGGCATTCCTTCTTGTGTTCTTAATTGTGGTTTCCAGTGGCTATGCTTGGGTTGGTGTGAACTGGGGAACCATGGCGACCCACCAGCTTCCGCCCGAGAAGGTGGTCAAGATGCTGAAGGAAAATGGGTTCAGAAAACTGAAGCTGTTTGATGCAGATGAGTTCATTATGGCGGCTCTGATGGGGACCGGTATCGAAGTCATGGTGGCAATACCCAACAACATGTTGGACAAGATAAGCAACAGTCCCAAAGCTGCAGATTCTTGGGTGAATGATAATGTCACCAGCTACTTGTTCACTGGTGGTGTCAAAATCAAGTATGTTGCTGTGGGTAACGAGCCTTTCCTTAAAGCATATAATGGCTCCTTTGCAAAGAAAACTCTGCCAGCACTCAAGAACATACAGACATCACTTAATAAGGCTGGGTTGGGTTCAAAGATCAAAATTACTGTTCCATTCAATGCTGACATTTACTATTCGCCTGATTCAAATCCGGTGCCATCAGCCGGTGACTTTAGGCCTGAAGTGCGAGACCTCACCGTTGAAATAATCCAATTCTTATACGCAAACAATGCACCTTTCACAGTGAATATCTACCCTTTCCTTAGTCTTTATGGCAACGAAGATTTCCCTTTTGATTTTGCATTTTTTGATGGAAACAACAAGCCTCTTAGGGATGGTAAGACACTTTACACCAATGTGTTTGATGCAAATCTTGACACACTTCTGTGGGCTTTAGACAAGGCAGGGTACCCTGACATGGAGGTTATGATTGGAGAAATTGGGTGGCCAACTGATGGTGACAAGAATGCTAATGCCAAGAATGCTAAAAGATTCAACCTTGGTTTGCTTAAACATGCTCTAAGTGGCAAGGGTACCCCTAAAAGGAAAGGCACAATTGACTTGTTTCTATTCAGCCTCATTGATGAGGACACCAAAAGTGTTGCTCCTGGGAATTTTGAGAGGCATTGGGGGATTTTTGAGTTTGATGGCAAGCCAAAGTATGAATTAGACTTAACAGGTCAACATCAGCAAAAGGGTCTTGTCCCAGTGGAAGGTATCAAGTACATGGAAAAGAGGTGGTGTATTTTGGATCCAGATGTTACTAACTTGGATGATTTGGCTGGTAACATTGACTATGCTTGCACTTTTTCTGATTGTACTTCCCTTGGCTATGGCTCTACCTGTAATAATCTTAGTGTCCAAGGGAATGCGTCTTATGCCTTCAATATGTATTATCAAGTGAACAACCAACAGAATTGGGACTGTGATTTCTCTGGTTTGGCTGTCATAACACATAAGGATCCATCACTAAATGGATGCCAATTCCCTGTAATGATCTCTAGTAGTTCTTCTTTGCTACTGCATGGAGGGTTTTCAGACATCCTTAAGAAAGCACTGAGGGTGTTTATTTTTGTCATGTTTTTGCTATAA 1512 0.4246 MFCSVTIILEPSQKPAKEMAPNCLHQVAFLLVFLIVVSSGYAWVGVNWGTMATHQLPPEKVVKMLKENGFRKLKLFDADEFIMAALMGTGIEVMVAIPNNMLDKISNSPKAADSWVNDNVTSYLFTGGVKIKYVAVGNEPFLKAYNGSFAKKTLPALKNIQTSLNKAGLGSKIKITVPFNADIYYSPDSNPVPSAGDFRPEVRDLTVEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFFDGNNKPLRDGKTLYTNVFDANLDTLLWALDKAGYPDMEVMIGEIGWPTDGDKNANAKNAKRFNLGLLKHALSGKGTPKRKGTIDLFLFSLIDEDTKSVAPGNFERHWGIFEFDGKPKYELDLTGQHQQKGLVPVEGIKYMEKRWCILDPDVTNLDDLAGNIDYACTFSDCTSLGYGSTCNNLSVQGNASYAFNMYYQVNNQQNWDCDFSGLAVITHKDPSLNGCQFPVMISSSSSLLLHGGFSDILKKALRVFIFVMFLL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1274 503 Pfam Glycosyl hydrolases family 17 44 364 IPR000490 GO:0004553|GO:0005975
Gso4g1274 503 ProSitePatterns Glycosyl hydrolases family 17 signature. 280 293 IPR000490 GO:0004553|GO:0005975
Gso4g1274 503 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 493 IPR044965 GO:0004553|GO:0005975
Gso4g1274 503 Gene3D Glycosidases 43 373 - -
Gso4g1274 503 Gene3D - 381 477 - -
Gso4g1274 503 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 23 493 - -
Gso4g1274 503 Pfam X8 domain 387 455 IPR012946 -
Gso4g1274 503 SUPERFAMILY (Trans)glycosidases 44 363 IPR017853 -
Gso4g1274 503 SMART X8_cls 386 469 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1274 Gso-Chr4 32939763 32942453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1274 24 473 Miscellaneous Gene Families AT2G19440 58.444 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1274 - - gmx:100781894 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1274 4 32939763 32942453 Gso6g1790 6 20894145 20897035 GST