Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1239 ATGGGGACGACGAAGAACAACAACAACAACTTCAATTCTACCTCAAAATCTGATAACAGTGCCAATGACAACAAAAACAACACACGTGTGGTGTTGAATGTCTACGACCTCACCCCTCTCAACAATTACCTTTATTGGTTTGGGTTTGGAATCTTTCACTCCGGCATTGAAGTGCACGGTAAGGAGTATGGATTTGGAGCCCATGACTTCCCCGCCAGTGGAGTATTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTTGTGTACAGATGTTCTGTTACTTTAGGCCAAGTAAATATGCATCCTTCTGAGTTTCGGACATTTATTGAGGGTATAGCTAATGAGTATCATGGGGATACCTATCACCTTATTTCTAAGAACTGCAATCATTTTACGGATGATATGTCTCATAGATTGAGTGGAAAACGGATTCCAGGTTGGGTGAATCGGCTTGCTAAACTAGGTTCACTTTGCAGTTGTCTACTTCCGGAAGTTGTTGAAGTAACTACCGTTAAACAGCTACCAGAATATCATGAATGTTCAGAAGATGAAATTACAGAATGTCTTTCGACTGCCTCGCCGTGTGGATCTCAATCAACATCGGGATTGGATGATGATCAAGAAAAGCGCCTTCTGTCACCTCTGGCTAGTAAAACAGATAACGTTTCTTTTGTTAAAGAGGCTCCATTAAAATGA 693 0.4185 MGTTKNNNNNFNSTSKSDNSANDNKNNTRVVLNVYDLTPLNNYLYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFVYRCSVTLGQVNMHPSEFRTFIEGIANEYHGDTYHLISKNCNHFTDDMSHRLSGKRIPGWVNRLAKLGSLCSCLLPEVVEVTTVKQLPEYHECSEDEITECLSTASPCGSQSTSGLDDDQEKRLLSPLASKTDNVSFVKEAPLK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1239 230 MobiDBLite consensus disorder prediction 1 24 - -
Gso4g1239 230 SMART DUF862_2a 28 166 IPR008580 GO:0008233
Gso4g1239 230 Gene3D PPPDE domains 22 185 IPR042266 -
Gso4g1239 230 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 5 230 - -
Gso4g1239 230 ProSiteProfiles PPPDE domain profile. 28 165 IPR008580 GO:0008233
Gso4g1239 230 MobiDBLite consensus disorder prediction 192 214 - -
Gso4g1239 230 PANTHER DESUMOYLATING ISOPEPTIDASE 5 230 IPR008580 GO:0008233
Gso4g1239 230 Pfam PPPDE putative peptidase domain 29 162 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1239 Gso-Chr4 30050333 30053724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1239 K22763 - gmx:100810582 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0994 17 9286208 9289312 Gso4g1239 4 30050333 30053724 PCT
Gso4g1239 4 30050333 30053724 Gso17g0994 17 9286208 9289312 PCT