Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0994 ATGGGAGTGGAGGAGAACACCCCTAACTCCATTTCCACCTCACAATGCCACGAAGAACAAAGCAACAACAAAATCAACACGCATGTGCTCTTGAATGTCTACGATCTCACCCCTGTCAATAATTACGTCTACTGGTTTGGATTTGGCATCTTTCACTCTGGCATTGAAGTACATGGTAAGGAGTATGGTTTTGGAGCCCATGACTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAGGAAATGCCCTGGATTCATATATAGATGTTCCATCTCTTTGGGTCAAACCAATATGAATCCTTCTGAATTTCGTACATTTATTGAAAACATGGCTTCTGAGTATCATGGAGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGACGATCTCTCTTATAGATTGACTGGGAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCTTTGTGCAGCTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCTGAATACCATGAATGCTCGGAAGATGAATTTGTTGAATCTCTTTCACCTGCCACACCCCGTGAGTCAACAGAAATAGATGAGGAGCAAGAAAAGCACCTTCTTTTGCCATCAGATAGAACTGAGGATGTTCATTTCGTTAAAGAGACGCAAGTGAAATAA 678 0.4174 MGVEENTPNSISTSQCHEEQSNNKINTHVLLNVYDLTPVNNYVYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFIYRCSISLGQTNMNPSEFRTFIENMASEYHGDTYHLITKNCNHFTDDLSYRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSPATPRESTEIDEEQEKHLLLPSDRTEDVHFVKETQVK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0994 225 Pfam PPPDE putative peptidase domain 28 161 IPR008580 GO:0008233
Gso17g0994 225 PANTHER DESUMOYLATING ISOPEPTIDASE 15 225 IPR008580 GO:0008233
Gso17g0994 225 Gene3D PPPDE domains 22 179 IPR042266 -
Gso17g0994 225 SMART DUF862_2a 27 165 IPR008580 GO:0008233
Gso17g0994 225 ProSiteProfiles PPPDE domain profile. 27 164 IPR008580 GO:0008233
Gso17g0994 225 MobiDBLite consensus disorder prediction 183 207 - -
Gso17g0994 225 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 15 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0994 Gso-Chr17 9286208 9289312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0994 K22763 - gmx:100778961 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0994 17 9286208 9289312 Gso17g0994 17 9286208 9289312 ECH
Gso17g0994 17 9286208 9289312 Gso4g1239 4 30050333 30053724 PCT
Gso4g1239 4 30050333 30053724 Gso17g0994 17 9286208 9289312 PCT