Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1222 ATGAAATTCGGAAAGAGCCTGAGCAACCAGATCGAGAAAACGCTGCCCCAATGGCGTGACAAGTTCCTGTCCTACAAGGAGCTGAAGAAGAAGTTGAAGCTCGTGGAGCCCAAACCCATTAATGGCGTGGAAGAACGCCCCACCAAACGCGCAAGGCACGAGGGAGACATCATCATCATGTCCAAGGAGGAAACTGACTTCAGGAACTCCATCGAACAAGAACTCCACAAATTCAACACCTTCTTTGTCGAGAAAGAGGAAGAATGCATCATCAAATTGAAGGAGCTACAGGATAGGGTTGCCAAAGTAAAAAATTCTAATGAGCAATTGATGCAAATTCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTCGAAAACTATAGTGCCCTTAACTACATAGGATTAGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCTTTCATTCAGAAGGTCTTGCAACAGCCTTTCTTCACCACTGACCTTCTATACAAGCTTGTGAAGGAGTGTGAAACAATGCTTAACCACCTTTTCCCGGTGAACGATCCTTCGACTTCTGGCGAGGCACCTCCCCAAGCTGAGGAGGGATGTGATGCTTCAACTTCAACCAGCACAAAGAGTAGTGATGATCTGCTGATGCCTAAGGAGTTAGCAGCAGCCAACCATCACATTGAGAGCCTTTATATGAAGAGTACCATTTCAGCTTTGCATGTTTTGCAGGAAATTCGAAAGGGAAGCTCAACAGTTAGCATGTTTTCATTGCCACCATTGCAGATAAGTGGCTTGGAAGAAACATGGAACAAAATCCCTATTCTGGAACAAACAGCCAAGTAA 861 0.4472 MKFGKSLSNQIEKTLPQWRDKFLSYKELKKKLKLVEPKPINGVEERPTKRARHEGDIIIMSKEETDFRNSIEQELHKFNTFFVEKEEECIIKLKELQDRVAKVKNSNEQLMQIRKEIVDFHGEMVLLENYSALNYIGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLNHLFPVNDPSTSGEAPPQAEEGCDASTSTSTKSSDDLLMPKELAAANHHIESLYMKSTISALHVLQEIRKGSSTVSMFSLPPLQISGLEETWNKIPILEQTAK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1222 286 Pfam SPX domain 1 36 IPR004331 -
Gso4g1222 286 Pfam SPX domain 109 161 IPR004331 -
Gso4g1222 286 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 286 - -
Gso4g1222 286 Coils Coil 93 113 - -
Gso4g1222 286 MobiDBLite consensus disorder prediction 190 220 - -
Gso4g1222 286 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
Gso4g1222 286 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 286 IPR031142 GO:0016036
Gso4g1222 286 CDD SPX_AtSPX1_like 2 148 - -
Gso4g1222 286 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1222 Gso-Chr4 28607985 28611511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1222 - - gmx:100790400 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0966 17 9092191 9094876 Gso4g1222 4 28607985 28611511 PCT
Gso4g1222 4 28607985 28611511 Gso17g0966 17 9092191 9094876 PCT