Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0966 ATGAAATTCGGGAAGAGCCTGAGCAGCCAGATCGAGAAAACCCTGCCAGAGTGGCGCGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGCTCAAGCAATTCGACCCTCCCGCCCCCGCCTCCGCCGCCGATGAACGCCCCGGCAAGCGCCTCAAGACCGACGCCGGCAACGCCGACGCCGACGCCGTTTCCGACGCCTCCGACATGTCGAAGGAGGAGAGCGACTTCCGGAACCTGCTGGAGAATGAACTCGACAAATTCAACACCTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAGACTCAAGGAGTTACAAGATAGTGTGGCCCAAGTTAAGGGTTCGAGGGAAGAGATGATGAAAATCCACAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACTGACTTGCTCTACAAGCTTGTAAAGGAGTGTGAAACAATGCTGGACCACCTTTTCCCTGTGAATGATCCTGCTCCAGTTTCCACTGAGACAACTCCCCAAGCTGAAGGTTTTGATCCTTCAACTTCAACCACTACCAAGAGTGATGGTTTGGTGATTCCGAAGGAATTAGCTGAGATCGAGTACATGGAGAGCCTTTATATGAAGAGTACTGTATCAGCATTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACAGTTAGCATGTTTTCATTGCCACCGTTGAAGATAAGTGGTTCAGAAGAAGAAACATGGAAGAAAATCCCTGTTCTGGAACAAGCAGCCAAGTAA 888 0.4831 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAPASAADERPGKRLKTDAGNADADAVSDASDMSKEESDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDSVAQVKGSREEMMKIHKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDHLFPVNDPAPVSTETTPQAEGFDPSTSTTTKSDGLVIPKELAEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKISGSEEETWKKIPVLEQAAK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0966 295 MobiDBLite consensus disorder prediction 203 224 - -
Gso17g0966 295 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 295 - -
Gso17g0966 295 CDD SPX_AtSPX1_like 2 158 - -
Gso17g0966 295 ProSiteProfiles SPX domain profile. 1 169 IPR004331 -
Gso17g0966 295 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 295 IPR031142 GO:0016036
Gso17g0966 295 Pfam SPX domain 1 35 IPR004331 -
Gso17g0966 295 Pfam SPX domain 122 171 IPR004331 -
Gso17g0966 295 MobiDBLite consensus disorder prediction 34 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0966 Gso-Chr17 9092191 9094876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0966 - - gmx:100813365 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0966 17 9092191 9094876 Gso17g0966 17 9092191 9094876 ECH
Gso17g0966 17 9092191 9094876 Gso4g1222 4 28607985 28611511 PCT
Gso4g1222 4 28607985 28611511 Gso17g0966 17 9092191 9094876 PCT