Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0693 ATGGTGAATCCCTTGGTGGAACGTGCCACGAGCAGCATGCTCGTGGGCCCTGATTGGGCCTTGAACATGGAGATCTGTGACATACTCAATCGTGACCTTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAGTTCCTAGAGTTCAAATTCTTGCACTGACGCTGCTGGAGACAATCATAAAGAATTGTGGGGACATTGTCCACATGCATGTTGCTGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATTATCATGTCAGAGAGAAGATATTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGGTCAAGGGCAAGATATCCACAGTATTATGCAGCATACCAGGAGCTTTTGCATGCTGGCACAGCATTCCCTCAGAGGTATGAGCAATCTACACCTGTATTTACACCGCTACAAACACAGCCATTGTCATCATACCCTCAAAATATACGAGACACTGTTGCTCGGCAAGACACAGCTGAGTCCTCAGTGGAGTCTGAGTTTCCAGCCCTAAGTTTGTCCGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCATTAGACCCTGGTAACAAAGAAGGGCTTCAGCAGGAAGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCGGATGAGTCACTGCTTTGCCAAGGCCTAGCTCTGAATGATGATCTGCAGCGTGTCCTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTGCTCAAAATCATACTGAGAAACCGAAGCCTGTTCCTACTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTGATATTGGAGACACAAGTAAACAAACAGATGTGAGATCGTCTTCTAGTGCTGAAGCTGGGTCGCAAACATTAAATCAGCTAATGCTTCCTGCCCCCCCAACATCAAATGGATCAGCCCCCCCTGCAAAGGTTGATCCCAAAGTGGACCTACTCAGTGGTGACGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTTGTTCCTCTTGGAGAACAGCAGCCAGCCAGCCCTATGTCTCAACAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAGCAATGCACCTATTTCTGTTAATACCCAGCCAATTAATATTGTTGGCCAAACCAGTCCGTTAGCTCCTCAATTTCAACAACAGACTTTCATATCTCAAGGGGTGTTTTACCCCAACGGAAGTGTGCCAAATGTGGGGTCACCTCGGTATGAGCAATCACCTTTTGCGCAGAGCACAGGTCCTTCCTGGAATGGCCAGGTTGCGCAACAGCAACAGCCTCTTTCACCAGTTTATGGTACAGCAAGTGGTGGATCATTTCCGCCACCACCCTGGGAAGCACAATCTACAGACAATGATAGTCCAGTAGCAGGCAGTCAATACCCACAACCACTGCAAGTCACTCAAATGGTTATGACGCGTTTACAAAGCGGTGCACATCCTCAGGGACCTCAAGCAATGGGGCATGACCAAGCTGTTGGAATGTATATGCAGCCAAATGCTGTCCATATGTCAACCATCAATAACCATGTTCAAAGCAATCAATTAGGCTTGTACCCGCAAAATATTCAGGGTGTTGCTGGTTCCTATATGGATATGGTTTCACATCAAATGCATAATAGTCCTGTGGCTTCCATGTATCCTCAACAGATGTATGGCAACCAATTCGGAGGATATGGCTATGGTCAGCAACCAAGGGTTCAGTATGTTGAGCAGCAAATGTATGGTTTATCTGTCAGAGATGATGGTGCTCTGAGAAATTCTAACCAGGTTTCTTCTACATCCTATGTGCCACCGGGGAAGCCTTCCAAGCCAGAAGATGAGTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAACCAAAATTTACTCCTGATCCAACTGGTAGCATGTAA 2001 0.4528 MVNPLVERATSSMLVGPDWALNMEICDILNRDLGQAKDVVKGIKKRIGSKVPRVQILALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDYHVREKILILIDTWQEAFGGSRARYPQYYAAYQELLHAGTAFPQRYEQSTPVFTPLQTQPLSSYPQNIRDTVARQDTAESSVESEFPALSLSEIQNARGIMDVLAEMLNALDPGNKEGLQQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTSAQNHTEKPKPVPTGALVDVDGPLVDIGDTSKQTDVRSSSSAEAGSQTLNQLMLPAPPTSNGSAPPAKVDPKVDLLSGDDYNSPKAETSLALVPLGEQQPASPMSQQNALVLFDMFSNGSNAPISVNTQPINIVGQTSPLAPQFQQQTFISQGVFYPNGSVPNVGSPRYEQSPFAQSTGPSWNGQVAQQQQPLSPVYGTASGGSFPPPPWEAQSTDNDSPVAGSQYPQPLQVTQMVMTRLQSGAHPQGPQAMGHDQAVGMYMQPNAVHMSTINNHVQSNQLGLYPQNIQGVAGSYMDMVSHQMHNSPVASMYPQQMYGNQFGGYGYGQQPRVQYVEQQMYGLSVRDDGALRNSNQVSSTSYVPPGKPSKPEDELFGDLVNMAKVKPKFTPDPTGSM* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0693 666 MobiDBLite consensus disorder prediction 432 496 - -
Gso4g0693 666 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Gso4g0693 666 MobiDBLite consensus disorder prediction 620 634 - -
Gso4g0693 666 MobiDBLite consensus disorder prediction 301 317 - -
Gso4g0693 666 SUPERFAMILY GAT-like domain 139 269 - -
Gso4g0693 666 PANTHER TARGET OF MYB PROTEIN 1 1 659 - -
Gso4g0693 666 PANTHER TOM1-LIKE PROTEIN 1 659 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gso4g0693 666 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Gso4g0693 666 CDD GAT_GGA_like_plant 188 266 - -
Gso4g0693 666 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Gso4g0693 666 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Gso4g0693 666 CDD VHS 2 130 - -
Gso4g0693 666 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Gso4g0693 666 MobiDBLite consensus disorder prediction 620 643 - -
Gso4g0693 666 MobiDBLite consensus disorder prediction 267 317 - -
Gso4g0693 666 Gene3D - 1 148 IPR008942 -
Gso4g0693 666 Pfam VHS domain 4 130 IPR002014 GO:0035091|GO:0043130
Gso4g0693 666 MobiDBLite consensus disorder prediction 432 468 - -
Gso4g0693 666 MobiDBLite consensus disorder prediction 478 496 - -
Gso4g0693 666 Gene3D - 179 275 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0693 Gso-Chr4 6771003 6778284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0693 - - gmx:100805762 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0693 4 6771003 6778284 Gso6g0695 6 6407977 6414662 GST
Gso4g0693 4 6771003 6778284 Gso17g1619 17 27287716 27307160 PCT