Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0559 ATGGTGACAAGTACACAGCTAAAGGTAAAAAATATTGGATTCACTGGGGTTTTCTGGTTGATCTTCAATCCACTAGTAGATGAGTTCCCTGCTTTTGGAGCTGTTTACTTTTCCTTGAAAGAGAAGAGAGATCTGGATTTTACTCTCAAGGTTATTGGTGGCGATTTATCAACTTTACCGGGGATATCTGATGCTATAGAGGAAACAATTAGAGATGCCATTGAAGACTCTATAACTTGGCCAGTACGCAAAGTTATACCAATTCTACCCGGGGATTACAGTAATCTAGAGTTGAAACCGGTTGGAATACTAGAAGTAAAACTAGTGCAAGCTAAGAACTTAACAAATAAAGATATAATTGGGAAATCCGATCCTTATGCTGTCATATTTGTACGCCCCCTCCGTGACAGAACCAAAACCAGTAAAATAATGAACAACCAGTTGAATTCATTATTGAAGATGCGTCAACGCAGCACTTGA 480 0.3875 MVTSTQLKVKNIGFTGVFWLIFNPLVDEFPAFGAVYFSLKEKRDLDFTLKVIGGDLSTLPGISDAIEETIRDAIEDSITWPVRKVIPILPGDYSNLELKPVGILEVKLVQAKNLTNKDIIGKSDPYAVIFVRPLRDRTKTSKIMNNQLNSLLKMRQRST* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0559 159 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 100 149 IPR035892 -
Gso4g0559 159 Pfam C2 domain 102 149 IPR000008 -
Gso4g0559 159 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 7 152 IPR045050 GO:0008289
Gso4g0559 159 PANTHER SYNAPTOTAGMIN-4 7 152 - -
Gso4g0559 159 Gene3D C2 domain 100 151 IPR035892 -
Gso4g0559 159 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 1 89 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0559 Gso-Chr4 5403036 5406690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0559 - - gmx:100779036 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0559 4 5403036 5406690 Gso6g0554 6 5137184 5142832 GST