Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0516 ATGGCGTTTTGGAGATCTCTCGTAGCGTTCTCTGCGGTTCTTCTGCTTCTCATCCATGGCTCTCACTGCTTCTACCTCCCCGGCGTCGCTCCACAGGATTTCCAGAAGGGAGATTCATTGCAAGTGAAAGTAAATAAATTAACATCAACGAAGACCCAGCTTCCTTATTCATATTATTCACTTCCCTATTGTGCCCCATTAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTTGATGCTAAAACTGCTAAGGAGTTCAAAGAGAAGATCAGTGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTTTTCCCTTGAAACGGACTGATCAGGATTCAACTGCCTATCAGCTTGGTTTTCTTGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAGGAGGAGAAATACTTTATTCACAACCATTTGGCATTTACTGTTAAGTACCATAAAGACATGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTACACCATTCAGTGTTAAACATGAATACGAAGGTAAATTTGATGTAAAAACGACTCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAACTCCAACAGTCCCCAAGAGGTTGAAGAGGGCAAGGAAATTATCTTCACATATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCTGGCATGGTGGCAATGATTATGCTGAGGACACTGTACCGTGACATTGCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAGGAGACTGGTTGGAAGCTTGTCCATGGTGATGTATTTAGGCCCCCCAACAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTCGGCATGATACTAGTAACCATGATATTTGCTGTCCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATATTTGCTGGGTACTCGTCAACTCGCTTGTACAAAATGTTCAAAGGGTCGGAGTGGAAAAAAGTTGCCCTCAGGACTGCAACCATGTTCCCTGCAGTTGTCTCTACCATTTTCTTTGTTTTAAATGCTCTCATATGGGGCCAAAAATCATCAGGAGCTGTGCCATTTGGCACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCAGTTCCACTTGTTTTTGTGGGTAGCTATGTCGGATTCAAGAAGCCTGCGATTGAGAATCCTGTGAAAACGAACAAGATCCCAAGGCAGATTCCTGAGCAGGCGTGGTACATGAACCCAGTTTTCTCTGTCCTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATTCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATTCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTATTTGTGGTGGTGGCGGTCATACCTTACCTCTGGTTCCTCCGCACTTTACCTCTTTCTTTATGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCAATATTCTACTTTGGGTACATGCTTATAGCGTCTTACGCATTTTTTGTGGTAACCGGCACCATCGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1914 0.4237 MAFWRSLVAFSAVLLLLIHGSHCFYLPGVAPQDFQKGDSLQVKVNKLTSTKTQLPYSYYSLPYCAPLKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNILCNLKLDAKTAKEFKEKISDEYRVNMILDNLPLVFPLKRTDQDSTAYQLGFLVGLKGQYSGSKEEKYFIHNHLAFTVKYHKDMLTESARIVGFEVTPFSVKHEYEGKFDVKTTRLTTCDPHAKHTVVNSNSPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKKVALRTATMFPAVVSTIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0516 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 637 IPR004240 GO:0016021
Gso4g0516 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 637 - -
Gso4g0516 637 SUPERFAMILY MFS general substrate transporter 277 461 IPR036259 -
Gso4g0516 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0516 Gso-Chr4 4928058 4932174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0516 6 637 Miscellaneous Gene Families AT5G10840 83.912 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0516 K17086 - gmx:100780976 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0516 4 4928058 4932174 Gso6g0512 6 4673791 4677965 GST
Gso14g0891 14 10437815 10442722 Gso4g0516 4 4928058 4932174 PCT
Gso17g1890 17 37829009 37833255 Gso4g0516 4 4928058 4932174 PCT
Gso4g0516 4 4928058 4932174 Gso14g0891 14 10437815 10442722 PCT
Gso4g0516 4 4928058 4932174 Gso17g1890 17 37829009 37833255 PCT