Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1890 ATGGCGTTTTGGAGATCCCTCGCGTTCTCTGCGATCCTTCTCTCGCTCTTCATCCATGGCGCTCTCTGCTTCTACCTCCCCGGCGTCGCTCCACAGGACTTCCAGAAGGGAGATCCACTGCAAGTAAAAGTAAACAAATTGACTTCAACGAAGACCCAGCTTCCTTATACATATTATTCTCTTCCTTATTGTCCACCAAATAAAATAGTGGATAGTGCTGAAAATCTTGGAGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCGTTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTTAAACTTGATGCCAAAACTGCAAAAGAGTTCAAGGAGAAGATTGATGATGAATATCGAGTGAACATGATCCTTGATAACCTTCCTCTGGTTGTTCCCATAAAACGGATGGATGCAGACTCTACTGTTTATCAACTCGGTTTCCATGTTGGACTCAAAGGGCTGTATAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCTTTTACTGTCAAGTATCATAGAGATACACTTACTGAATCTGCTAGAATTGTGGGCTTTGAAGTTAAGGCATTCAGTGTTAAACATGAATTTGAAGGGAAGTGGGATGAAAAGACCACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAATTCCAACAGTCCTCAAGAGGTTGAAGAGAACCAGGAAATTATCTTCACATATGATGTTGATTTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAACTCATTGATGATTGTTCTCTTCCTCTCAGGAATGGTAGCAATGATAATGCTGCGTACACTTTACCGTGATATTTCAAAGTACAATGAGTTAGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAATAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATTCTAGTAACAATGCTGTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGAGGCGGGCTAATGACAGCCATGCTCTTGCTTTTTGTTTTCATGGGGATTTTTGCTGGTTATGCCTCTGCCCGCATATATAAAATGTTCAAAGGAACAGAGTGGAAGAGTATTGCCCTCAGAACTGCAATCATGTTCCCCGCAATCGTTTCTGCCATTTTCTTTGTATTAAATGCTCTCATATGGGGACAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTCGTTGGTGCCTATGTTGGTTTTAAGAAGCCTGCAATTGAGAATCCTGTGAAGACAAACAAAATTCCAAGGCAGATCCCTGAGCAGGCATGGTACATGAATCCAGTCTTTTCAGTTCTGATAGGAGGAATCCTTCCATTTGGAGCTGTTTTCATCGAGCTTTTCTTTATCCTTACTTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGTTTCCTCTTCTTGGTCTTCGTCATCCTCATCGTCACTTGTGCTGAAATCACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGATCATACCTCACATCTGGCTCTTCTGCCCTATACCTTTTTCTTTACGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTACTATACTTTGGTTACATGCTCATAGCATCCTACGCCTTCTTTGTCGTAACCGGAACCATTGGATTTTATGCGTGCTTTTGGTTCACAAGGCTCATCTACTCTTCAGTCAAGATTGATTAG 1914 0.4216 MAFWRSLAFSAILLSLFIHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCPPNKIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRMDADSTVYQLGFHVGLKGLYSGSKEEKYFIHNHLAFTVKYHRDTLTESARIVGFEVKAFSVKHEFEGKWDEKTTRLTTCDPHAKHTVVNSNSPQEVEENQEIIFTYDVDFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMLFAVLGFLSPSNRGGLMTAMLLLFVFMGIFAGYASARIYKMFKGTEWKSIALRTAIMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1890 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 637 IPR004240 GO:0016021
Gso17g1890 637 SUPERFAMILY MFS general substrate transporter 275 461 IPR036259 -
Gso17g1890 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
Gso17g1890 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1890 Gso-Chr17 37829009 37833255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1890 11 637 Miscellaneous Gene Families AT5G10840 85.533 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1890 K17086 - gmx:100810506 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0891 14 10437815 10442722 Gso17g1890 17 37829009 37833255 GST
Gso17g1890 17 37829009 37833255 Gso4g0516 4 4928058 4932174 PCT
Gso17g1890 17 37829009 37833255 Gso6g0512 6 4673791 4677965 PCT
Gso4g0516 4 4928058 4932174 Gso17g1890 17 37829009 37833255 PCT
Gso6g0512 6 4673791 4677965 Gso17g1890 17 37829009 37833255 PCT