Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2190 ATGGCTTACACTGCAGTTGCCATGCCTACCTCTCCAGCAGCTACCTCGGCAACTGTAGACATTGCAAAAGAGCATAACGGTCTTCGCCGCTCGCAATCCAGCAAAGAACTACACACACGTGCCGTTATGCGGAGGTCTTATTCTGACAACCACCTATGTTGCTCCATCAATCGCGTACAAGCCACATCAGTGCCACCAAAACTTAAGAGCAATCAACCAATGGGGATTTCACCATTTCAATTTTCAGGCTCCATTCTTCCAAATTCACTGCGCTCCTTCTTGTTTGACCCAGAAACAAGCAATGATCTAGTTGTGGAGGAGAAGGTGGTAAGCATTGAGGAAAACATGGTAGAAAGCAGCAAGGAAGAGATAGTGAATAGAGCCAACTGGGTAGAGAGGCTTATGGAAATCAAGAAACATTGGAGAAACAGACTGCCCAAAGAAAGCATGAATACAGATGCGATATGCAACGACAATACGTATGATGAATGTGAATGTGATGGGGATGGAGATGACAATGTTTGTGTGGTGGGTGAAGATGAAGATGAGCAGGAAGTGACATATGATCGTGACTCATTCTCAAGCTTTCTGGTTCAAGTGCCATGGTCTGATACCAAACTATACTCTCAACTCGCTTTCCTCTGCAACATGGCCTATGTAATACCCCAAATCAAGGCTAAGGACTTGCGAAGATACTACAGCCTTCAATTTATAACATCTTCTTTAGAGAAGAAAGCTGAAGTGGCCAAGTTAAAAGTGCAACTTAATCAGGACTCCACTTGCGTTCCTGTAGATGACTCGGTAGCCTCTCAAGATGTATCAAAGAAAGACAAAGATAATACAAAGAAGCCTCAAATCAAACTAGCTTATGATATTGCTGCCTCAGCAGCCTCTTATGTCCAATTACGAGCTAAGGATCTTTTGCACCGTGCTGCTAAGTCACAAGACACACAACAGACTGAAAATGAAGATTCTAATGAAAGAGAAGACTTGCCGGGGCGAGAAGAGCTAGAAGGCACTTCGCGAGGTTACAAATCAGAGGTTGCAGCTTATGTTGCAGCGTCCACAATGACAGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAACAGCAAATGACCTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCGGCAATTACACTCGATGCTTTGTAATTCAGGGCTCAGACTCCCTGGCATCTTGGCAAGCAAACCTCTTCTTTGAGCCCACCAAATTCGAGGGCACAGACGTACTTGTTCACAGAGGAATTTATGAGGCCGCAAAAGGAATATACAAGCAATTCATGCCAGAAATAATGGAGCATTTGAAGAGACATGGGGATCGTGCAAAGCTTCAGTTCACTGGGCACTCCCTTGGGGGTAGTCTCTCTCTTCTGGTTCATTTGATGCTATTGACTAACAAGGTTGTGAGTCCCTCCACTCTTGGACCAATAGTGACTTTTGGCTCACCGTTTGTATTCTGTGGAGGGCAACAAATAATCGATGAGCTAGGCCTGGATGAGAGCCAAATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCCTTCTCCTGCAATTACCCAAACCATGTAGCTCTAGTCCTTAAGCGCTTACACACCTCATTTCGGTCACATCCATGTCTGCTAAAAAATAAGCTGTTGTACTCACCACTGGGTAAAATATTCATTCTCCAACCCGATGAGAAGACATCTCCTCCGCATCCTTTACTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAATGTGGATACTCTCCAAGTGTTCTTCGAACCTTCCTGAATCAACCACACCCTATTGATACACTAAGTGATCCAACGGCATATGGTTCAGAAGGCACAATCCTAAGAGACCACGACTCCAGCAACTACCTCAAAGCCATCAATGGAGTGTTGAGGAAACATTCAAAGATTATCGTCGGCAGAGTGAGGAAGCAAAGGATTAATCAGTTGTGGCCTCTGTTGACATCACCATCTCCACACTCTAGGAGCCATGAACAGAACTCGGAGAGATGCAGCTTGAGGACAAAGGAGATAGTTACAGGGGTTTAA 2103 0.4508 MAYTAVAMPTSPAATSATVDIAKEHNGLRRSQSSKELHTRAVMRRSYSDNHLCCSINRVQATSVPPKLKSNQPMGISPFQFSGSILPNSLRSFLFDPETSNDLVVEEKVVSIEENMVESSKEEIVNRANWVERLMEIKKHWRNRLPKESMNTDAICNDNTYDECECDGDGDDNVCVVGEDEDEQEVTYDRDSFSSFLVQVPWSDTKLYSQLAFLCNMAYVIPQIKAKDLRRYYSLQFITSSLEKKAEVAKLKVQLNQDSTCVPVDDSVASQDVSKKDKDNTKKPQIKLAYDIAASAASYVQLRAKDLLHRAAKSQDTQQTENEDSNEREDLPGREELEGTSRGYKSEVAAYVAASTMTAVVAAGEKEKQETANDLQSLHSSPCEWFVCDDPGNYTRCFVIQGSDSLASWQANLFFEPTKFEGTDVLVHRGIYEAAKGIYKQFMPEIMEHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLGPIVTFGSPFVFCGGQQIIDELGLDESQIHCVMMHRDIVPRAFSCNYPNHVALVLKRLHTSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKCGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAINGVLRKHSKIIVGRVRKQRINQLWPLLTSPSPHSRSHEQNSERCSLRTKEIVTGV* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2190 700 CDD Lipase_3 349 537 - -
Gso3g2190 700 Pfam Lipase (class 3) 398 535 IPR002921 GO:0006629
Gso3g2190 700 MobiDBLite consensus disorder prediction 311 339 - -
Gso3g2190 700 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 700 IPR043367 GO:0008970
Gso3g2190 700 SUPERFAMILY alpha/beta-Hydrolases 381 571 IPR029058 -
Gso3g2190 700 Gene3D alpha/beta hydrolase 340 561 IPR029058 -
Gso3g2190 700 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 1 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2190 Gso-Chr3 47089011 47093760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2190 1 674 Acyl Lipid Metabolism Gene Families AT3G61680 54.639 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2190 - - gmx:100780077 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2144 19 49956551 49961840 Gso3g2190 3 47089011 47093760 GST
Gso3g2190 3 47089011 47093760 Gso7g0504 7 5090254 5094125 PCT
Gso7g0504 7 5090254 5094125 Gso3g2190 3 47089011 47093760 PCT