Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2144 ATGCAACAAGTGTCAAACACTGGAATCAGCATGGCTTACACTGCAGTTGCCATGCCTACATCTCCAGCAGCTACCTCTGCAACTATGGACATTGCAAAAGAGCATAATGGTCTTCGCCGCTCGCAATCCAGCAAAGAACTATGCACACGTTCCATTATGCGGAGGTCTTATTCTGACAACCACCTATGTTGCTCCATCAATCGCATACAAGCCACATCAGTGCCGCCAAAACTTAAGAGCAATCGATCAATGGGCATTTCCCCATTTCAATTTTCAGGCTCCATGCTTCCAAATTCACTGCGCTCCTTCTTGTTTGACCCAGAAACAAGCAAGGATGTAAGTGTGGAGGAGAAGGTTGTAAGTATTGAGGAAAACATGGTGGAAAGCAGCAAAGAAGAGATAGCGAATAGAGCCAACTGGGTAGAGAGGCTTATGGAAATCAAGAAACATTGGAGAAACAGACTGCCGAAAGAAAGCATGGATCCAGATGCAATATGCAACGAAAATACGTATGATGAATGTGAATGTGATGGAGATGGAGATGACAATGTTTGTGTGGTGGGTGAAGATGAAGATGAGCAGGAAGTGACATATGATTGCGACTCATTCTCAAACTTTCTGGTTCAAGTACCATGGTCTGATACCAAACTATACTCTCAACTTGCTTTCCTGTGCAACATGGCCTATGTAATACCCCAAATCAAGGCTAAGGACTTGCGAAGATACTACAGCCTTCAATTTATAACATCTTCTTTAGAGAAGAAAGTTGAAGTGGCCAAGTTAAAAGTGAAACTTGATCAAGACTCCACTCGTGTTCCTATAGATGACTCGGATGTCTCAGAGAAAGGCAAAGACAGTATAAAGAAGCCTCAAATCAAACTAGCTTATGATATTGCTGCCTCAGCAGCCTCTTATGTCCAATTACGAGCGAAGGATCTCTTACACCGTGCTGCTAAGTCACGAGACACACAACAGACTGAAAATGAAGATTCTAATGGAAGAGGAGACTCACCACGAGAAGAGCTAGAAAGCACTTCGCGAGGTTACAAATCAGAGGTTGCAGCTTATGTTGCAGCGTCCACAATGACAGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAGCAGCAAATGACCTCCAATCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCGGCAATTACACTCGATGCTTTGTAATTCAGGGCTCTGACTCCCTGGCATCTTGGCAAGCAAACCTCTTCTTTGAGCCCACCAAATTCGAGGACACAGACGTACTTGTTCACAGAGGAATTTATGAGGCTGCAAAAGGAATATACAAGCAATTCATGCCAGAAATAATGGAGCATTTGAAGAGACATGGGGATCGTGCTAAGCTTCAGTTCACTGGGCACTCCCTTGGGGGTAGTCTCTCTCTTTTGGTTCATTTGATGCTATTGACTAACAAGGTTGTGAGTCCCTCCACTCTTCGACCAGTAGTAACTTTTGGCTCACCATTTGTATTCTGTGGAGGCCAACAAATAATCAATGAGCTAGGCCTGGATGAGAGCCAAATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCCTTCTCCTGCAACTACCCAAACCATGTAGCTGTAGTCCTTAAGCGCTTAAACAGCTCATTTCGGTCACATCCATGTCTGCTGAAAAATAAGCTGTTGTATTCACCACTGGGTAAAATATTCATCCTCCAACCCGATGAGAAGACATCTCCTCCACATCCTTTACTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAAGGTGGATATTCTCCAAGTGTTCTTAGAACCTTCCTGAATCAACCACACCCTATTGATACACTAAGTGATCCAACAGCATATGGTTCAGAAGGCACAATCCTAAGAGACCACGACTCCAGCAACTACCTCAAAGCCATCAACGGAGTCTTGAGGAAACATTCAAAGATTACCGTTGGCAGAATGAGGAAGCAAAGGATTAATCAGTTGTGGCCTCTGTTGACATCACCATCTCCACACTCTTGGAGCCATGAACAGAACTTGGAGAGATGCAGCTTGAGGACAAAGGAGATAGTTACAGGGGTTTAA 2118 0.4438 MQQVSNTGISMAYTAVAMPTSPAATSATMDIAKEHNGLRRSQSSKELCTRSIMRRSYSDNHLCCSINRIQATSVPPKLKSNRSMGISPFQFSGSMLPNSLRSFLFDPETSKDVSVEEKVVSIEENMVESSKEEIANRANWVERLMEIKKHWRNRLPKESMDPDAICNENTYDECECDGDGDDNVCVVGEDEDEQEVTYDCDSFSNFLVQVPWSDTKLYSQLAFLCNMAYVIPQIKAKDLRRYYSLQFITSSLEKKVEVAKLKVKLDQDSTRVPIDDSDVSEKGKDSIKKPQIKLAYDIAASAASYVQLRAKDLLHRAAKSRDTQQTENEDSNGRGDSPREELESTSRGYKSEVAAYVAASTMTAVVAAGEKEKQEAANDLQSLHSSPCEWFVCDDPGNYTRCFVIQGSDSLASWQANLFFEPTKFEDTDVLVHRGIYEAAKGIYKQFMPEIMEHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGQQIINELGLDESQIHCVMMHRDIVPRAFSCNYPNHVAVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKGGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAINGVLRKHSKITVGRMRKQRINQLWPLLTSPSPHSWSHEQNLERCSLRTKEIVTGV* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2144 705 MobiDBLite consensus disorder prediction 318 348 - -
Gso19g2144 705 SUPERFAMILY alpha/beta-Hydrolases 386 577 IPR029058 -
Gso19g2144 705 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 11 705 IPR043367 GO:0008970
Gso19g2144 705 MobiDBLite consensus disorder prediction 318 347 - -
Gso19g2144 705 Pfam Lipase (class 3) 403 540 IPR002921 GO:0006629
Gso19g2144 705 CDD Lipase_3 354 542 - -
Gso19g2144 705 Gene3D alpha/beta hydrolase 339 559 IPR029058 -
Gso19g2144 705 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 11 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2144 Gso-Chr19 49956551 49961840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2144 11 679 Acyl Lipid Metabolism Gene Families AT3G61680 54.519 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2144 - - gmx:100790575 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2144 19 49956551 49961840 Gso3g2190 3 47089011 47093760 GST
Gso19g2144 19 49956551 49961840 Gso7g0504 7 5090254 5094125 PCT
Gso7g0504 7 5090254 5094125 Gso19g2144 19 49956551 49961840 PCT