Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2167 ATGGTGGAAAAGTTGAAAGGAGGGGTTGTTGTAGGGAAAAGAGGAGGACCTTCTACTCCCCCACCCACATGGAGACTTGAGTTTCCATCTCAGCAGAATGAGAATAACAAAAACAAAAACAGAAACCAGGTTCAAGAGTTCCTTAACTTTCCCACCTCAACAACACTCTCTACCAGAACACTCTGTGCCAAACTCTGGCAAATTCAGCCCCACCAATTGGCCCCACTTCCCAAAATGAACAAGCCTTCAACCCTCCGCCGCCACCGTAGGGACACACTTCTTAAGCTTCCAAATCTTAAACAGTTGTCTGAACCTCCTCATACTCACCAGCCAGCATCTGCAATCGGACTGAGAAGGCATGTTCAAACATCACCTTTCCAGCACCATAGATCAGCTAAAAGAAATGGTCGCCTTAAACAGCATGTCTCCCCTCCTTGTTACAGTTGCTCAATGCAAGTGGCACCTCATGTAACATCTAAAAGTTCCTTAGACTTCAAGGGTTGGATTACAGAGTCAAGTCGCAACCCTAAAACATTCAGAGAGTTACTCAAGGTACTCAACCGTATTTGGTGTCTTGAAGAACAGCATGCATCAAATATATTAATAGTGAAAGCCCTGAAAATGGAACTAGATCTTTCTCGGGCCCAGGTTAAAGAGTTACAACAAGAAAAGCAATTGAATAAGCGTGATATGGAGAACTTAATGAAGCAAATAGCCGAGGAGAAGCTTGTTAGGAAGAACATAGAACATGATAAAATTAAAGCTGCAATTCAATCTGCCATGCAAGAGATAGAAGAAGAAAGGAGGTTAAGAAAGCATTCAGAAAGCCAGCACCGGAGGCTGGCTCGGGAGTTTTCTGAAGTGAAGTCTTCATTCAGTGGTTCTCTGAGAGATCTTGAAAAAGAGAGAAAAACACGGGTCCTTTTAGAGAATCTGTGTGACGATTTTGCCAAAGGAATAAGAGATTATGAATATGAGGTAGGTTCTCTTATGGATAATAATGCTGAGAAGGATCAAGTTAAAGGGGATAGCCTTGATAGGCTAATACTTCATCTTTCAGAAGCTTGGCTTGACGAGCGCAAGCAAATGAAGTTAGCTCTAGCTGGCCATGATGATCTCCCAGAGATAGATTCATCAATTGTTGACAGGCTAGGTGTTGGTACTGAAACATTTCTTCATGCAAAAAGATGTGTTAACTTGATAAAATATGGTAACTCCTCCACAAAGGAGCCCAAGGAAATTTACCCTTGCCTACTACATTCATTGGACGAGAACAACAACAATACTGCAGAGGTCCATAAAGAAAAGAAGGGAAGGAACAATTCAGTGAGGAAACAAGCACGTGTGAATGTGATGAAGAGCATGTTGTCATGTGATGAAAATGAGAGTTGGTTTGTTGAAATGGGAGGGGAGAGCACAGCACTATTCAATACCCCTGGAGCATCAACTGTGGGTGAGACAACAACACAAGGTCCACCAGAAAGTAATACATTATTATGGACAAAGAGAATGAATTCAAGTCATGTAGTTAGAAACAGTTCCTTGTCTTCTGAAGGCAATGATAAGGTTTATCCTGAGACCATTTTCAGGGAAGATTCATTTGTCCATTCTGCAGTTACTGGTAATGCTAGTCCACTAAAGGACAACAACAACACATTGATGGCAAAACTGCTTGAAGCAAGGTTGGAGAGGCAGATATCTCGCTCCAAACATAGGAATGTCAACGGTATCACACTCTGA 1740 0.4213 MVEKLKGGVVVGKRGGPSTPPPTWRLEFPSQQNENNKNKNRNQVQEFLNFPTSTTLSTRTLCAKLWQIQPHQLAPLPKMNKPSTLRRHRRDTLLKLPNLKQLSEPPHTHQPASAIGLRRHVQTSPFQHHRSAKRNGRLKQHVSPPCYSCSMQVAPHVTSKSSLDFKGWITESSRNPKTFRELLKVLNRIWCLEEQHASNILIVKALKMELDLSRAQVKELQQEKQLNKRDMENLMKQIAEEKLVRKNIEHDKIKAAIQSAMQEIEEERRLRKHSESQHRRLAREFSEVKSSFSGSLRDLEKERKTRVLLENLCDDFAKGIRDYEYEVGSLMDNNAEKDQVKGDSLDRLILHLSEAWLDERKQMKLALAGHDDLPEIDSSIVDRLGVGTETFLHAKRCVNLIKYGNSSTKEPKEIYPCLLHSLDENNNNTAEVHKEKKGRNNSVRKQARVNVMKSMLSCDENESWFVEMGGESTALFNTPGASTVGETTTQGPPESNTLLWTKRMNSSHVVRNSSLSSEGNDKVYPETIFREDSFVHSAVTGNASPLKDNNNTLMAKLLEARLERQISRSKHRNVNGITL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2167 579 Coils Coil 203 284 - -
Gso3g2167 579 MobiDBLite consensus disorder prediction 25 41 - -
Gso3g2167 579 MobiDBLite consensus disorder prediction 1 41 - -
Gso3g2167 579 PANTHER GB|AAF24581.1 433 575 IPR043424 -
Gso3g2167 579 PANTHER GB|AAF24581.1 1 423 IPR043424 -
Gso3g2167 579 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 1 423 - -
Gso3g2167 579 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 433 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2167 Gso-Chr3 46904900 46908626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2167 - - gmx:100812498 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2122 19 49759973 49763653 Gso3g2167 3 46904900 46908626 GST
Gso3g2167 3 46904900 46908626 Gso7g0542 7 5488045 5492698 PCT
Gso3g2167 3 46904900 46908626 Gso16g0245 16 2815644 2820299 PCT
Gso7g0542 7 5488045 5492698 Gso3g2167 3 46904900 46908626 PCT
Gso16g0245 16 2815644 2820299 Gso3g2167 3 46904900 46908626 PCT