Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2122 ATGGAAAGAAGAGAAAAAGGTGAGAAGAGAGAAGGAGGGTTAATGGTGGAAAAGTTGAAAGGAGGGGTTGTTGTGGGAAAAAGAGGAGGCCCTTCTACTCCCCCACCCACATGGAGACATGAGTTTCCATCTCAGCAGAATGAGAATGGTAATAACAAAAACAAAAACCAGGTTCAAGAGTTCCTCGACTTTCCCACCTCAACAACTCTCTCTGCCAGAAAACTCTGTGCCAAACTCTGGCAAATTCAGCCCCACCAACTAGCCCCACTTCCCAAAATGAACAAGCCGCCACTCACCCTCCGCCGCCACAATAGGGACACACTTCTTAAGCTTCCAAATCTTAAACAGTTGTCTGAACCTCCTCATACTCACCAGCCAGTATCTGCAACGGGACTGAGAAGACATGTTCAAACATCACTTGTCCAGCACCATAGATCTGCTAAAAGAAATGGTCGCACTAAACAGCCTGTATCCCCTCCTTGCTACAAAAGCTCAATGCAAGTGGCACCGTATAATCATGTAAATCCTATAAGTTCCCTAGAATTCAAGGGTTGGATTACAGAGTCAAGTCGCAACCCTAAAACATCCAGAGAGTTACTCAAGGTACTCAACCGTATTTGGAGTCTTGAAGAACAGCATGCATCAAATATATCAGTAGTGAAAGCCCTGAAAATGGAACTAGAACTTTCTTGGGCACAGGTTAAAGAGTTACAACAAGAAAAGCAATTGAATAAGCGTGATATGGAGAACTTAATGGAACAAATAGCTGAGGAGAAGCTTGTTAGGAAGAACAAAGAACATGACAAAATTAAAGCTGCAATTCAATCTGTCATGCAAGAGATAGAAGATGAAAGGAGGTTAAGAAAGCATTCAGAAAGCCTGCACCGGAGGCTGGCTAGGGAGCTTTCTGAAGTGAAGTCTTCATTCAGTGGTTCTCTGAGAGATCTTGAGAAAGAGAGAAAAACACGGATCCTTTTAGAGAACTTGTGTGATGATTTTGCCAAAGGAATAAGAGATTATGAATACGAGGTACGCTCTCTTATGCCCAATAATGCTGAGAAGGGTCAAGTTAAAGGGGACAGCCTTGATAGGCTAATACATCTTTCAGAAGCTTGGCTTGACGGGCGCAAGCAAATGAAGTTAGCTCAAGCTGGCCATGATCTCCCAGAGATAGATTCATCAATTGTTGACAAGTTAGGTGTTGATATTGAAACATTTCTTCATGCAAAAAGATCTTTTAACTCCTCCACGAAGGAGCCCATGCAAATTTACCCTTGCCTACATTCATTGGACAACAACAACAAAATTGAGGAGGTCCATAAAGAAAAGAAGGGAATGAACAATTCAGCGAGGAAACAAGTTGTTCAGTCCAAGGAAATCACCGAGGATTGTAGCGAGTTGCAAGCACATGTGATGAAGAGCATGTTGTCATGTGATGAAAATGAGAGTTGGTTTGTTGAGAGGAAATCAAGTGAAAGCACAGCTCTATTCAATACCCCTGGGGCATCAACTGTGGGTGAGGCAACACAAGGTCAACCAGAAAGTAATACATTATTATGGACAAAGAAAATGAATTCAAGTCACGTAGTTAGAAACAGTTCCTTGTCTTCGGAAGGCAATGATAATAAGGTTTATCCTGAGAGTATTTTCAGGGAAGATTCATTTGTCCATTCTGCAGTTACTGGTAATGGTAGTCCAGTAAAACAGTGGAAATCTACACTGATTATCCCAGATTTTGACAAGTCTGAGTCTTGTTCCAAATTGCCTACAAAGGACAACAACACATTGATGGCAAAACTGCTTGAAGCAAGGTTGGAGAGGCAGAAATCTCGCTCCAGAGCTAGCATTAGCAAAAGAGAAGTTTCTGATGAGAATCATGGGAATGTGAGTGGTAGCTGTAACGGTATAAACACTTTGATCTTCTGTCAATAA 1932 0.4198 MERREKGEKREGGLMVEKLKGGVVVGKRGGPSTPPPTWRHEFPSQQNENGNNKNKNQVQEFLDFPTSTTLSARKLCAKLWQIQPHQLAPLPKMNKPPLTLRRHNRDTLLKLPNLKQLSEPPHTHQPVSATGLRRHVQTSLVQHHRSAKRNGRTKQPVSPPCYKSSMQVAPYNHVNPISSLEFKGWITESSRNPKTSRELLKVLNRIWSLEEQHASNISVVKALKMELELSWAQVKELQQEKQLNKRDMENLMEQIAEEKLVRKNKEHDKIKAAIQSVMQEIEDERRLRKHSESLHRRLARELSEVKSSFSGSLRDLEKERKTRILLENLCDDFAKGIRDYEYEVRSLMPNNAEKGQVKGDSLDRLIHLSEAWLDGRKQMKLAQAGHDLPEIDSSIVDKLGVDIETFLHAKRSFNSSTKEPMQIYPCLHSLDNNNKIEEVHKEKKGMNNSARKQVVQSKEITEDCSELQAHVMKSMLSCDENESWFVERKSSESTALFNTPGASTVGEATQGQPESNTLLWTKKMNSSHVVRNSSLSSEGNDNKVYPESIFREDSFVHSAVTGNGSPVKQWKSTLIIPDFDKSESCSKLPTKDNNTLMAKLLEARLERQKSRSRASISKREVSDENHGNVSGSCNGINTLIFCQ* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2122 643 PANTHER GB|AAF24581.1 7 620 IPR043424 -
Gso19g2122 643 MobiDBLite consensus disorder prediction 39 53 - -
Gso19g2122 643 Coils Coil 234 268 - -
Gso19g2122 643 MobiDBLite consensus disorder prediction 608 628 - -
Gso19g2122 643 MobiDBLite consensus disorder prediction 1 53 - -
Gso19g2122 643 MobiDBLite consensus disorder prediction 1 16 - -
Gso19g2122 643 MobiDBLite consensus disorder prediction 608 625 - -
Gso19g2122 643 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 7 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2122 Gso-Chr19 49759973 49763653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2122 - - gmx:102667580 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2122 19 49759973 49763653 Gso3g2167 3 46904900 46908626 GST
Gso19g2122 19 49759973 49763653 Gso7g0542 7 5488045 5492698 PCT
Gso19g2122 19 49759973 49763653 Gso16g0245 16 2815644 2820299 PCT
Gso7g0542 7 5488045 5492698 Gso19g2122 19 49759973 49763653 PCT
Gso16g0245 16 2815644 2820299 Gso19g2122 19 49759973 49763653 PCT