Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1956 ATGATCGCTGTCAACCTTATTTGCAACTGCACCATGAAACCATCCCCTAAGATTCTCATCGGTTACAAGAATTCATCGTTTCTTGCAAGATGTCACCATACTCTTGCCATGTCTATGTCTAACTACTCTAACTCTTGTGACATCAATATTTATCGCAACACCATGCAGTGTCCTTTTCACATGCGCGAATTCGGACGCATAATGCATGGTAACCACCAAGTTTTTGGGTTACCCTCTTCGAGTTTTGGCCAATCAAGGTCCCTTAGTTTAAGCTCAACAAAACGGGATGCCTCTTCCATTGCCGGAGTTGACTTAAACTTCAAGGCTCGTGACTTCTCCGGCTCGGTCGGGACACGCGTGGATGACAACAATGGTGAAATGGCCTACGTTAAGGGTGGCATGAATGTGAAGCCAATAGTGGTGGAAAGTGTTGAGGAAGAGTCTCGGTTAGAAGTTGGCGAGGAAGACGAGAACATGGAGAACTCGGGTGGCGTAAAGAATGCAGATGAGGCTGAGAACGTACAAGAGGAAACAGAAGCGGAGAAAGAGGCATGGAGGTTATTGCAGGAGGCACTTGTGACGTATTGTGACTCCCCCGTGGGGACAGTGGCAGCAAATGATTCGGATAGCGAGCAACCTTTGAATTATGATCAGGTTTTCATTCGGGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGACATTGTCAAGAACTTTCTCCTTCACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAAAACATTGAAACTTGATCATGAAAAAACAGAAGTTTTAGATCCTGATTTTGGGGAGTCAGCTATTGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATGCTGCTGCGGGCTTATGGGAAGATTACTGGGGACTACGGCTTGCAAGAAAGGTTGGATGTTCAAACAGGCTTAAGAATGATCCTTAACTTGTGTTTAACGGATGGCTTCGATATGTTTCCTTCCCTGTTAGTTACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAAGCTTTATTTTACTCAGCTCTTCGCTCGGCCCGTGAGATGGTTACTGAAGATGAAAACTCCAAAAATCTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTCCACATTAGAGAATACTATTGGTTGGATATGCGAAAGATAAATGAGATATACAGGTACAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTACGTGGCTAATGGATTGGATTCCAGAGGAAGGAGGATATCTGTTAGGGAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTCATGCTAGGAAATCTTTGGTCTATTGTTTCCTCTTTGGGCACCCCAAGACAGAATAATGCTATTTTGAATCTGATAGATGCAAAATGGGGTGATCTCGTGGGGGAAATGCCTCTTAAGATATGTTATCCTGCTTTGGAGCATCATGAATGGCGAATAATTACGGGCTGCGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGGTCTTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGGAGAGAACTGAACTAGCAGAGAAAGCAATTGCCTTGGCTGAGAAAAGGCTGCCACGTGATTCATGGCCAGAATATTATGACACACGCTCAGCAAGATTTGTTGGCAAACAAGCCCGGCTTTATCAAACTTGGACTTTAGCTGGTTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAAACTGGCTTCCTTGTTATGCTGGGATGAGGATTTGGAGATTCTTGAGACATGTGTTTGTTTACTTCATAAGAGTGGCAGGATCAAATGCTCCCGTGATGTTGCTAAGTCTCAGATTCTCGTGTGA 1992 0.4453 MIAVNLICNCTMKPSPKILIGYKNSSFLARCHHTLAMSMSNYSNSCDINIYRNTMQCPFHMREFGRIMHGNHQVFGLPSSSFGQSRSLSLSSTKRDASSIAGVDLNFKARDFSGSVGTRVDDNNGEMAYVKGGMNVKPIVVESVEEESRLEVGEEDENMENSGGVKNADEAENVQEETEAEKEAWRLLQEALVTYCDSPVGTVAANDSDSEQPLNYDQVFIRDFIPSALAFLLKGEKDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTLKLDHEKTEVLDPDFGESAIGRVAPVDSGLWWIMLLRAYGKITGDYGLQERLDVQTGLRMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVTEDENSKNLVGEINNRLSALSFHIREYYWLDMRKINEIYRYKTEEYSLDATNKFNIYPDQIPTWLMDWIPEEGGYLLGNLQPAHMDFRFFMLGNLWSIVSSLGTPRQNNAILNLIDAKWGDLVGEMPLKICYPALEHHEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMERTELAEKAIALAEKRLPRDSWPEYYDTRSARFVGKQARLYQTWTLAGFLASKMLLKNPKLASLLCWDEDLEILETCVCLLHKSGRIKCSRDVAKSQILV* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1956 663 PANTHER - 5 663 IPR024746 GO:0033926
Gso3g1956 663 Gene3D - 203 612 IPR012341 GO:0005975
Gso3g1956 663 SUPERFAMILY Six-hairpin glycosidases 184 614 IPR008928 GO:0005975
Gso3g1956 663 Coils Coil 168 188 - -
Gso3g1956 663 Pfam Alkaline and neutral invertase 184 622 IPR024746 GO:0033926
Gso3g1956 663 PANTHER ALKALINE/NEUTRAL INVERTASE 5 663 - -
Gso3g1956 663 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1956 Gso-Chr3 45109167 45112793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1956 - - gmx:100812691 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1956 3 45109167 45112793 Gso10g1332 10 39638574 39642526 PCT
Gso10g1332 10 39638574 39642526 Gso3g1956 3 45109167 45112793 PCT