Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1332 ATGAACACAATTACCCTTATTCGCAACCGCGCCATTAATTCCGCTCGCAGGATTCTCACCGGTTCTAGAACTTCATTGTTTTTCGGGTCCACTCCTGCAAAATCTGACCACACTCTTTCCATTGCTAACAATTCGCTGAAACCTCGTTTCAATCATGACCGCGCCAATCACCACCCTTTTCAAATTCATCGCACAAAGGGTATTGATGTTGCTCAGAAAGTTTTTGGCTTACCCTCTTCGAATTTCGCCCCTCCATCTATGCATTTTAGTTTGAGCACATCGAGCAGGGACGTTTCCACCTTCAAGGTTCGAAATTTCTCGACCTCTGTTGAGACCCGCGTCAAGGACAACAACAATTTTGAGAGGATTTACGTACAGGGTGGCATGAACAATGTGAAACCATTGGTGGTGGAAAGTGTTCATAAGGAGGATGAGAGGGATTTGGGTGGTGATGTGAATGTGAGTGTGGGAAAGACTAAAGGGGAGGAGGACTCAGAGGTGGAAAAAGAAGCATGGAAGTTGTTGCAGGGTGCTGTTGTGACTTATTGTGGCAACCCTGTGGGAACTATGGCTGCAAATGATCCTGGGGACAAGATACCCTTGAATTATGATCAGGTCTTTATTAGGGATTTTATACCTTCAGCACTTGCTTTCTTGCTTAGAGGAGAAAGTGAGATTGTCAAGAACTTTCTTCTTCACACCTTGCAATTGCAGAGTTGGGAGAAAACGGTGGACTGCTACAGTCCAGGGCAGGGCTTGATGCCTGCAAGTTTCAAAGTTAGAACTGTTGCTCTTGATGAAGATAACCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTCTTGCGGGCTTATGGGAAGCTCACTGGTGACTGCAGCTTGCAAGAAAGGGCGGATGTTCAAACAGGCTTAAAAATGATCCTTAACTTGTGTTTAACAGATGGGTTTGATATGTTTCCTTCTCTGTTAGTCACTGATGGGTCTTGCATGATAGACAGGCGGATGGGAATTCATGGTCACCCCCTTGAGATCCAAGCATTATTTTACTCAGCTCTTCGCTGCTCACGTGAGATGCTTGTTGCAACTGATGGAACCAATAATCTTATTAGAGCCATTAACAACAGACTCAGTGCACTGTCATTTCACATTAGAGAATATTATTGGGTGGATATGAAAAAGATGAATGAAATATACAGGTATAAAACTGAAGAGTACTCCACAGATGCCATCAACAAATTCAACATCTACCCAGAACAAATTCCATTGTGGTTAATGGATTGGATTCCTGAAGAAGGTGGGTATCTGATTGGGAATTTGCAGCCAGCTCACATGGACTTCCGGTTTTTCTCACTTGGAAATCTTTGGTCTATTGTCTCATCATTGGGCACCCCAAGACAGAACCAGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTTGTGGGCCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGCATAGTTACTGGTTGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTCACACTGGCATGCATCAAAATGGGGAGAATTGAACTTGCCCAGAAAGCAGTTGCTTTGGCTGAGAAAAGACTGCCAGTTGATTCTTGGCCTGAATACTATGATACACGTACTGGAAAATTTATCGGAAAACAAGCCCGAATGTATCAAACATGGACCATAGCTGGTTTCCTTACATCCAAGATGCTTTTGAAGAATCCTGAGATGGCATCCATGTTATTCTGGGAGGAGGATTACGAGCTTCTTGACATATGTGTTTGTGGACTTAGCAAGAGTGGCAGGAAAAGGTGTTCCCGTGGTGCCGCAAGGTCTCAAATTCTTGTATGA 1956 0.4387 MNTITLIRNRAINSARRILTGSRTSLFFGSTPAKSDHTLSIANNSLKPRFNHDRANHHPFQIHRTKGIDVAQKVFGLPSSNFAPPSMHFSLSTSSRDVSTFKVRNFSTSVETRVKDNNNFERIYVQGGMNNVKPLVVESVHKEDERDLGGDVNVSVGKTKGEEDSEVEKEAWKLLQGAVVTYCGNPVGTMAANDPGDKIPLNYDQVFIRDFIPSALAFLLRGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDEDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDCSLQERADVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLVATDGTNNLIRAINNRLSALSFHIREYYWVDMKKMNEIYRYKTEEYSTDAINKFNIYPEQIPLWLMDWIPEEGGYLIGNLQPAHMDFRFFSLGNLWSIVSSLGTPRQNQAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIVTGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVALAEKRLPVDSWPEYYDTRTGKFIGKQARMYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICVCGLSKSGRKRCSRGAARSQILV* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1332 651 SUPERFAMILY Six-hairpin glycosidases 171 602 IPR008928 GO:0005975
Gso10g1332 651 Pfam Alkaline and neutral invertase 171 610 IPR024746 GO:0033926
Gso10g1332 651 PANTHER - 6 651 IPR024746 GO:0033926
Gso10g1332 651 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 6 651 - -
Gso10g1332 651 Gene3D - 202 601 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1332 Gso-Chr10 39638574 39642526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1332 - - gmx:100797025 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1956 3 45109167 45112793 Gso10g1332 10 39638574 39642526 PCT
Gso10g1332 10 39638574 39642526 Gso3g1956 3 45109167 45112793 PCT