Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1951 ATGGCACCTAACATCACCACCGTTGTTGCCAATGCCACCACTGAGCAATTACCCAAAGCTCATGGAGGAAGTAGTGGGCGTGCCTTTGTGACTTTTCTTGCTGGAAACGGTGATTATGTAAAGGGTGTTGTGGGTTTGGCCAAAGGACTGAGAAAGGCCAAAAGCATGTACCCTTTGGTGGTTGCTGTGTTACCAGATGTTCCTGAAGAACATCGTGCGATTCTCAAATCCCAAGGTTGCATTGTCAGGGAGATTGAACCTGTGTACCCTCCTAAGAACCAGACCCAGTTCGCCATGGCCTATTATGTCATCAATTACTCCAAGCTACGTATTTGGGAGTTCGTGGAGTACCAGAAGATGATATACCTAGACGGCGACATCCAAGTTTTTGGAAACATTGACCACTTGTTTGATCTTCCTAATAATTATTTCTATGCGGTGATGGATTGTTTCTGCGAGAAGACTTGGAGCCACACCCCTCAGTTCCAGATTGGGTACTGCCAACAGTGCCCTGATAAGGTTCAATGGCCCTCTCACTTTGGTACCAAACCTCCTCTATATTTCAATGCTGGCATGTTTGTTTATGAGCCTAATCTCAACACCTACCGTCATCTTCTCCAAACTGTCCAAGTCATCAAGCCCACGTCCTTTGCTGAGCAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAAGCCAATACCGAACGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAATGTTGAACTTGATCAAGTTCAAGTGGTTCATTACTGTGCTGCTGGGTCTAAGCCTTGGAGGTTCACTGGGAAGGAAGAGAACATGGATAGGGAAGATATCAAGATGCTTATGAAGAAGTGGTGGGACATATATGAAGATGAGACACTGGACTACAATAACAACTCTGTCAATGTGGAACGTTTCACATCAGTACTATTGGATGCTGGGGGTTTTCAGTTTGTGCCAGCACCTTCTGCTGCCTAA 996 0.4598 MAPNITTVVANATTEQLPKAHGGSSGRAFVTFLAGNGDYVKGVVGLAKGLRKAKSMYPLVVAVLPDVPEEHRAILKSQGCIVREIEPVYPPKNQTQFAMAYYVINYSKLRIWEFVEYQKMIYLDGDIQVFGNIDHLFDLPNNYFYAVMDCFCEKTWSHTPQFQIGYCQQCPDKVQWPSHFGTKPPLYFNAGMFVYEPNLNTYRHLLQTVQVIKPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELDQVQVVHYCAAGSKPWRFTGKEENMDREDIKMLMKKWWDIYEDETLDYNNNSVNVERFTSVLLDAGGFQFVPAPSAA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1951 331 Pfam Glycosyl transferase family 8 31 272 IPR002495 GO:0016757
Gso3g1951 331 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 25 301 IPR029044 -
Gso3g1951 331 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 331 - -
Gso3g1951 331 PANTHER GALACTINOL SYNTHASE 2 1 331 IPR030515 GO:0006012|GO:0047216
Gso3g1951 331 SUPERFAMILY Nucleotide-diphospho-sugar transferases 30 299 IPR029044 -
Gso3g1951 331 CDD GT8_Glycogenin 27 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1951 Gso-Chr3 45075359 45078586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1951 1 331 Glycosyltransferase AT1G56600 75.000 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1951 K18819 - gmx:100792129 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1951 3 45075359 45078586 Gso10g1329 10 39617581 39619415 PCT
Gso10g1329 10 39617581 39619415 Gso3g1951 3 45075359 45078586 PCT