Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1329 ATGGCTCCTAATATCACCACTGTCAAAACCACCATCACCGACGCTCAAGCCAAGGTCGCCACCGATCATGGTCGTGCCTACGTCACCTTCCTCGCCGGAAACGGTGACTATGTGAAAGGTGTCGTTGGCTTGGCAAAAGGTCTGAGAAAAGTGAAGAGCATGTACCCTCTGGTGGTTGCAGTGCTACCCGATGTTCCCCAAGATCACCGCAACATTCTCACCTCCCAAGGTTGCATTGTTAGAGAGATTGAGCCCGTGTACCCCCCAGAGAATCAAACCCAGTTTGCCATGGCATATTACGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGACGGTGATATCCAAGTTTTTGACAACATTGACCACTTGTTTGACTTGCCTGATAACTACTTCTATGCGGTGATGGACTGTTTCTGTGAGCCAACTTGGGGCCACACTAAACAATATCAGATCGGTTACTGCCAGCAGTGCCCCCATAAGGTTCAGTGGCCCACTCACTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTGTATGAGCCCAATTTGGCTACTTACCGTGACCTCCTTCAAACAGTCCAAGTCACCCAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGACAAATATAGGCCAATTCCTAATGTCTACAATCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAACGTTGAGCTTGACAAAGTTAAAGTGGTTCACTACTGTGCTGCTGGGTCTAAGCCTTGGAGGTACACTGGGAAGGAGGAGAATATGGAGAGAGAAGATATCAAGATGTTAGTGAAAAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTACAACAATCCACTCAATGTGGATAAGTTCACTGCGGCACTTATGGAGGTTGGTGAAGTCAAGTTCGTCCGTGCCCCATCTGCTGCTTAA 987 0.4752 MAPNITTVKTTITDAQAKVATDHGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPQDHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWGHTKQYQIGYCQQCPHKVQWPTHFGPKPPLYFNAGMFVYEPNLATYRDLLQTVQVTQPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYNNPLNVDKFTAALMEVGEVKFVRAPSAA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1329 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Gso10g1329 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 328 - -
Gso10g1329 328 PANTHER GALACTINOL SYNTHASE 2 1 328 IPR030515 GO:0006012|GO:0047216
Gso10g1329 328 CDD GT8_Glycogenin 25 295 - -
Gso10g1329 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Gso10g1329 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 301 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1329 Gso-Chr10 39617581 39619415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1329 1 328 Glycosyltransferase AT1G56600 74.260 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1329 K18819 - gmx:548050 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1951 3 45075359 45078586 Gso10g1329 10 39617581 39619415 PCT
Gso10g1329 10 39617581 39619415 Gso3g1951 3 45075359 45078586 PCT