Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1949 ATGATGGGTTGTGGCGGTGCAATCTCAGTGTCACTGCTGCTGCTTCTCTCTTGTTTTACAGAAATAGCCTTGGCTGGCTGCGATAAGGCTCCAGTGCTGTTCGTCTTCGGCGATTCCAACTCGGACACGGGTGGACTCGCCTCCGGACTCGGTTTCCCTATAAATCCTCCCAATGGCCGCAATTTCTTTCACAGATCCACTGGCCGCTTGTCCGATGGTCGCCTCCTCATCGACCTACTCTGCCTGAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCTGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCAAAATATGTTCCTTTCTCCCTCAATATACAGGTCATGCAGTTCCGGCGTTTCAAAGCTCGCTCCCTTGAACTTGTTACCGCAGGTGCAAGAAATTTGATCAATGATGAAGGCTTCCGTGATGCACTCTACTTGATTGATATTGGACAAAATGACCTTGCTGATTCATTTGCCAAAAATCTGTCATATGCGCAAGTCATCAAGAAAATCCCAGCAGTTATAACTGAAATTGAGAATGCTGTTAAGAATTTATATAATGATGGTGCCAGGAAGTTTTGGGTTCACAATACTGGGCCGTTGGGCTGTCTTCCAAAAATACTCGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACTCTGCAGCAAGATTGTTTAATGAAGAGCTGCTTCATTCAACTCAGAAACTAAGATCTGAACTGAAAGATGCTACTTTAGTCTATGTTGATATTTATACCATTAAGTATGACCTCATCACAAATGCCGCGAAATATGGTTTCTCGAATCCGTTGATGGTATGTTGCGGCTATGGAGGGCCTCCTTACAATTTTGACGTAAGGGTGACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGGGCTCGGTATGTGAGTTGGGATGGAATTCATCAAACTGAGGCTGCAAATACATTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGGACACCTTTTGATTTCTTCTGCACCAATGATTATGCACACTGA 1101 0.446 MMGCGGAISVSLLLLLSCFTEIALAGCDKAPVLFVFGDSNSDTGGLASGLGFPINPPNGRNFFHRSTGRLSDGRLLIDLLCLSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLELVTAGARNLINDEGFRDALYLIDIGQNDLADSFAKNLSYAQVIKKIPAVITEIENAVKNLYNDGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEELLHSTQKLRSELKDATLVYVDIYTIKYDLITNAAKYGFSNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHQTEAANTLIASKILSMAYSTPRTPFDFFCTNDYAH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1949 366 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 9 361 - -
Gso3g1949 366 Pfam GDSL-like Lipase/Acylhydrolase 33 344 IPR001087 GO:0016788
Gso3g1949 366 CDD SGNH_plant_lipase_like 31 346 IPR035669 -
Gso3g1949 366 PANTHER OS01G0329900 PROTEIN 9 361 - -
Gso3g1949 366 SUPERFAMILY SGNH hydrolase 33 347 - -
Gso3g1949 366 Gene3D SGNH hydrolase 24 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1949 Gso-Chr3 45044547 45064412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1949 30 351 Acyl Lipid Metabolism Gene Families AT4G10950 26.822 3.78e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1949 - - gsj:114407527 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1911 19 47828996 47833071 Gso3g1949 3 45044547 45064412 GST